Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01850 ATGGCTGAATTATTCCTCTTCAGCATCGCAGAATCACTCATAGCAAAGCTTTCTTCTTGGACATATGAAGAAACTTCACAGGTGCTGAGGTTATACCACCATCTGAGAGAGGTTTCACAAACTCTCTCATTAGTCAAGGCGGTTCTGTTAGACGCTGAGGAGAAGCAGCAGGAGAATTATGAGATGCAGGAATGGCTGAGGCAGATCAAACATGTCTTCTCTGATGCTGAAAATATGTTGGATGAATTTGAGTGCGAAACATTACGAAAAAAAGTTGTCCAAGCTCATGGCAACACCACAATCAAGGTAGCACACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCATTATAGAATGGCTCAACAGATCCAAAAAATCAAGAAGAGATTAGACAAGGTTGCAGCAGACAGACATAAGTTTGGTCTTGAAACAATTGATGTGGATAGACGTTTTGTAAATAGGAGGGATATGACGTACTCCTACGTTATTGATTCGGATGTCATAGGAAGGAATCAAGATAAAGAAAATATTATACAGCTTTTGGTGCAACAGAATCCGAAAAATAATGACAAAAGTCTCTCTGTTATCCCCATTGTGGGGATTGGAGGCTTGGGAAAGACCACACTAGCAAAGATTGTGTTCAATGATAGGAGGATACATGAGTTGTTCCCATTGAAGATGTGGGTTTGTGTTTCTATTGACTTTGAAATTAAGCAAGAGATTATTAAAATCATCAACTCTAATAATGCTTCTGCGCACCAACAAAATTTAGACAAAGTAGATGTGGAGCAACTTCAAAGTCAATTAAGAAACAAACTTGTCAGTCAAAAATTCTTACTAGTATTAGATGACGTGTGGAATGAAGATCTTGTTAAATGGGTTGAGTTGAGGAATTTAATACAAGTAGGTGCTGCAGGAAGTAAAATTTTGGTAACTACACGCAGTCACGTAACTGCTTCCATGATGGGCACGGTTCCCTCTTACAATTTAGAAGGCCTTTCCGAGGAGGATTCATTGTCTCTGTTTGTCAAATGGGCATTCAAAGGAGAAGAGAAAAGGTATCCATATTTAGTAAATATTGGGAGAGAAATTGTGAAAAAGTGCAAAGGGGTGCCTTTGGCAGTGAGAACATTAGGAAGTTTACTATATTTGAAAGATAAAAAAGAGGAATGGGAATTTGTGAGAGACAACAAAAATTGGAGTTCAATAAAACTTGACAGTGCTATGTGGCCTGCACTTAAATTAAGTTTTGATCAAATGCCATCCAATTTGAGGAAATGCTTTGCTTTGTTCAACCTTTACCCATGTGGCTATGCATTTGATAGTTTTGATGTTACATCGCTTTGGGGAGCACTTGGTCTCCTTCCATCACCAAATAGAAATCAAATATTGAAACACGATGCAAATCAATATATCTGTGAACTTTTTTCAAGATCTTTTCTGAAGGATGTTGTTGACTACGGCATTGGTTTTGCTTTTAAAATACATGAGTTGGTGCATGATATTGCACGCTATTTGGGAAAGGACTCTATAATTGTAAGATACCCCTTTGTATTTACACCCGAACACAGGTATGTCCAGCATCTATCTTTTCCTGAAAATGTTGGAATTGAAAATTTTCCAATCCAAAAATTTGTTGGTGCAAGAACCATACTATTTCCTACCCCAGGAGTAGGAGCCAACAGTGAAGCTTTTTTGCTTAAATTCGTGTCACGATGCAATAGTTTGCGATTTTTAGATTTAAGTGATTCTATGTATAAAGTTTTGCCTCCTTACATTGGCAAGCTGAAACATTTAAGATATCTCAGTCTTGAGAATAATAAAAGCCTAAAGAGACTTCCTGATTCTGTTTGCAACCTGCTAAAGTTAGAAGTTTTGATACTTAGTGGATGTACAGAGCTTGTAGCAATGCCTAAAGGTTTAAGAAAAATGATCAGTCTTCAACATTTGGAGATAACCACAAAGCAACGTGTTTTGCCAGAGGATGAGATTGCAAACTTGAGTTCTCTTCAGACTCTCAGAATCGAATTTTGCAACAATGTGGAATCTTTGTTTGGAGAGATTAAACTCCCTACTCTTAAAGTATTGTGTATTACCAGTTGCCAGAGTCTAAAGTCCTTGCCACTTGATATTGAATATTTTCCTAAATTAGAGACTTTGTTAGTTGATAACTGTGATGTGTTGGAGTTGTCAAAGGAACATGACCAAAATTCCAACTTGAGGTTGAAGATTGTAAATTTCATTTCATTGCCCCAGTTATTGACCTTGCCTCACTGGATTCGAGGTTCCACGGATACATTACAGTACTTGTTAATTTCAAGCTGCAACAATCTTGTGGGGCTTCCTCAATGGCTATCCGCTATGACTTGTCTGAAAACACTGTGTGTCACAAGCTGTCCTAATATGTTATCTCTCCATGAAGACATCCATCACCTCCCCACCCTTGAACGATTGGAAATTGACGGTAATCTTGAATCGTGCCAACACTTAACCATTGATGAACCAGAAGAAGTAGAAGAAAGGATAGAAGAATTGGAGTAA 2541 0.3782 MAELFLFSIAESLIAKLSSWTYEETSQVLRLYHHLREVSQTLSLVKAVLLDAEEKQQENYEMQEWLRQIKHVFSDAENMLDEFECETLRKKVVQAHGNTTIKVAHFFSSSNPLVFHYRMAQQIQKIKKRLDKVAADRHKFGLETIDVDRRFVNRRDMTYSYVIDSDVIGRNQDKENIIQLLVQQNPKNNDKSLSVIPIVGIGGLGKTTLAKIVFNDRRIHELFPLKMWVCVSIDFEIKQEIIKIINSNNASAHQQNLDKVDVEQLQSQLRNKLVSQKFLLVLDDVWNEDLVKWVELRNLIQVGAAGSKILVTTRSHVTASMMGTVPSYNLEGLSEEDSLSLFVKWAFKGEEKRYPYLVNIGREIVKKCKGVPLAVRTLGSLLYLKDKKEEWEFVRDNKNWSSIKLDSAMWPALKLSFDQMPSNLRKCFALFNLYPCGYAFDSFDVTSLWGALGLLPSPNRNQILKHDANQYICELFSRSFLKDVVDYGIGFAFKIHELVHDIARYLGKDSIIVRYPFVFTPEHRYVQHLSFPENVGIENFPIQKFVGARTILFPTPGVGANSEAFLLKFVSRCNSLRFLDLSDSMYKVLPPYIGKLKHLRYLSLENNKSLKRLPDSVCNLLKLEVLILSGCTELVAMPKGLRKMISLQHLEITTKQRVLPEDEIANLSSLQTLRIEFCNNVESLFGEIKLPTLKVLCITSCQSLKSLPLDIEYFPKLETLLVDNCDVLELSKEHDQNSNLRLKIVNFISLPQLLTLPHWIRGSTDTLQYLLISSCNNLVGLPQWLSAMTCLKTLCVTSCPNMLSLHEDIHHLPTLERLEIDGNLESCQHLTIDEPEEVEERIEELE* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01850 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 430 IPR027417 -
Phac1g01850 846 Gene3D - 332 415 IPR042197 -
Phac1g01850 846 Gene3D - 416 505 IPR036388 -
Phac1g01850 846 Gene3D - 150 325 IPR027417 -
Phac1g01850 846 SUPERFAMILY L domain-like 495 827 - -
Phac1g01850 846 Pfam NB-ARC domain 172 399 IPR002182 GO:0043531
Phac1g01850 846 PRINTS Disease resistance protein signature 272 286 - -
Phac1g01850 846 PRINTS Disease resistance protein signature 368 382 - -
Phac1g01850 846 PRINTS Disease resistance protein signature 195 210 - -
Phac1g01850 846 PRINTS Disease resistance protein signature 618 634 - -
Phac1g01850 846 Pfam Rx N-terminal domain 11 98 IPR041118 -
Phac1g01850 846 Gene3D Ribonuclease Inhibitor 559 740 IPR032675 -
Phac1g01850 846 Gene3D Ribonuclease Inhibitor 741 840 IPR032675 -
Phac1g01850 846 Coils Coil 66 86 - -
Phac1g01850 846 PANTHER DISEASE RESISTANCE PROTEIN RP 62 824 IPR044974 GO:0006952
Phac1g01850 846 Gene3D - 10 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01850 Phac-Chr1 28264956 28268606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01850 575 673 WRKY Transcription Factor Family AT4G12020 36.000 1.93e-06 50.1