Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01846 ATGGCCGAATCATTTCTCTTCAGCATCGCAGAGTCACTCATAGCAAAGATTGCTTCTCATGCTTTTCAAGAAGCTTCTCGATTGGTGGGTTTATATGACAATCTTGGAGACCTTACAAAGACTCTCTCTTTAGTCAAGGCTGTGTTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATCAGCTGCGCGAATGGCTCACTCAGCTCAAAATTGTCTTCTCCGATGCCGAAGATCTTTTGGATGAATTTGAGTGCCAAACACTGCGAAAGAAAGTGGTCAAAGCTCACGGTACCACCAAAGACAAGGTAAGTCACTTCTTCTCAAGCTCTAATCCACTTCTCTTTCGTTACAAAATGGCTCAACAAATTAAAGATATCAACAACAGACTAGACAAGGTTGCAGCTGATAGGCATAAATTTAATCTTCAAATAATTGATGTTGACACACGTGTTGTTCATCGGAGAGATATGACACACTCCCGTGTCAGTGATTCAGATGTCGTAGGAAGGAAACATGATAAAGAAAAGATCATAGAACTTTTGATGCCGCGGAATTCTAATGATGATGTAAGTCTTTCTGTTATTCCCATTGTGGGGATTGGAGGTTTGGGAAAGACTACGCTTGCAAAGTTTGTGTTCAATGACAGCAGGATCCAGGAGTGTTTTCCATTGAAGATGTGGGTGTGTGTTTCTAATGACTTTGACATTAAACAATTGATTATCAAAATCATCAATTCTGCCAATGATCAAGATGCTCCTCCTCACCAACAGAATTTGAATATGTTGGATCTGGAGCAACTACAAAATCAACTGAAAAACAAACTTTCCTCTCAAAAATTCTTACTCGTCTTAGACGATGTATGGAACGAAGATCGTGTTAAATGGGTTGAGCTGAGGAATTTAATCCAAGTAAGTGCAGCAGGAAGTAAAATCCTTGTGACCACACGCAGTCATTCAATTGCTTCCATGATGGGCTCAGTTCCCTCTCACATTTTAGAAGGTCTTTTTGAGGAGGATTCATTGTCTCTCTTTGTCAAGTGGGCATTTAAAGAAGGAGAAGAGGAAAATCATCCTCACTTGGTAAATATTGGGAGAGAAATTGTGAAAAAATGCAAAGGGGTCCCATTGGCAGTGAGAACATTAGGGAGTTTACTATTCTCAAAATTTGAGGTCAGTGAATGGGAATATGTGTGTGATAATGAAATTTGGAATTTGCCTCAAAACAAGGATGACATTTTACCTGCACTTAAATTAAGTTATGATCTTATGCCATCATATTTGAGACAATGTTTTGCAATATTTTCCCTTTACCCAAAGGACTACGAACTCAATAGTTATGAAATAACTGCAGTTTGGGGGGCACTTGGACTCATTGCATTACCAAAAAAGAACAAGACACTTGAAGATGTGGCCAATCAATATTTGCATGAATTTTTGTCAAGATCTTTTCTTCAAGATTTTACAAACTTTGGCTTTGTTTATCGTTTTACAATACATGATTTGGTGCATGATCTTGCTCTATTTGTTGCAAAGGATGAATCTCTATATGTAAGTTCCAGTATTCAAAATATTCCAGATAATGTTCGACATCTGTCTTTTGCTGAAAGCAGATTGTTTAGCAATTTATACAACAAAAAATCGGTAGCTGTGAGAACCATATTGTTTCCAAACGGTACAGAAGAAACCAACGACGAAGCTTTAATAAATACTTGTCTGTCAAAGTTCAAATATTTGCGAGTTTTGGATTTATGGTCTTCGACAATTGAGACTTTGCCCCATACCATTGCTAAGTTGAAACATTTGAGATATTTGGACATTGGCAAAAATCTCAACATTAAGAGACTCCCCGAGTCTATTTGCAAGCTCCAAAGTCTGCAAGTGTTAAGACTTGACGGATGCATAGAGCTGGAAGCATTGCCAATAGGATTAAGAAAGTTAATCAGTCTCAGACATTTAGAGTTCAGCACAAAGCAATCTATTTTGCCTGACAATGAGATTGCTAGTTTAGACTTGCTTGCAAATCTGTCTATTGAATCATGCAATAATTTGGAGTCTATATTCGGAGATGTGAAATTTCCAGTTCTTAAAGCATTGTATATTGTAATTTGGACTTGGAACTGTGGAAGGGCAACCACCTTGAAGGACAAAGCCACAAGCTAA 2160 0.381 MAESFLFSIAESLIAKIASHAFQEASRLVGLYDNLGDLTKTLSLVKAVLLDAQQKQEHNHQLREWLTQLKIVFSDAEDLLDEFECQTLRKKVVKAHGTTKDKVSHFFSSSNPLLFRYKMAQQIKDINNRLDKVAADRHKFNLQIIDVDTRVVHRRDMTHSRVSDSDVVGRKHDKEKIIELLMPRNSNDDVSLSVIPIVGIGGLGKTTLAKFVFNDSRIQECFPLKMWVCVSNDFDIKQLIIKIINSANDQDAPPHQQNLNMLDLEQLQNQLKNKLSSQKFLLVLDDVWNEDRVKWVELRNLIQVSAAGSKILVTTRSHSIASMMGSVPSHILEGLFEEDSLSLFVKWAFKEGEEENHPHLVNIGREIVKKCKGVPLAVRTLGSLLFSKFEVSEWEYVCDNEIWNLPQNKDDILPALKLSYDLMPSYLRQCFAIFSLYPKDYELNSYEITAVWGALGLIALPKKNKTLEDVANQYLHEFLSRSFLQDFTNFGFVYRFTIHDLVHDLALFVAKDESLYVSSSIQNIPDNVRHLSFAESRLFSNLYNKKSVAVRTILFPNGTEETNDEALINTCLSKFKYLRVLDLWSSTIETLPHTIAKLKHLRYLDIGKNLNIKRLPESICKLQSLQVLRLDGCIELEALPIGLRKLISLRHLEFSTKQSILPDNEIASLDLLANLSIESCNNLESIFGDVKFPVLKALYIVIWTWNCGRATTLKDKATS* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01846 719 Pfam Rx N-terminal domain 11 99 IPR041118 -
Phac1g01846 719 PANTHER DISEASE RESISTANCE PROTEIN RP 40 681 IPR044974 GO:0006952
Phac1g01846 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 432 IPR027417 -
Phac1g01846 719 Gene3D - 419 507 IPR036388 -
Phac1g01846 719 Gene3D - 149 329 IPR027417 -
Phac1g01846 719 Gene3D - 335 418 IPR042197 -
Phac1g01846 719 FunFam Probable disease resistance protein At1g61300 149 328 - -
Phac1g01846 719 Pfam Leucine rich repeat 577 633 IPR001611 GO:0005515
Phac1g01846 719 Gene3D Ribonuclease Inhibitor 511 701 IPR032675 -
Phac1g01846 719 SUPERFAMILY L domain-like 498 706 - -
Phac1g01846 719 Gene3D - 10 124 - -
Phac1g01846 719 Pfam NB-ARC domain 171 421 IPR002182 GO:0043531
Phac1g01846 719 PRINTS Disease resistance protein signature 274 288 - -
Phac1g01846 719 PRINTS Disease resistance protein signature 371 385 - -
Phac1g01846 719 PRINTS Disease resistance protein signature 194 209 - -
Phac1g01846 719 PRINTS Disease resistance protein signature 620 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01846 Phac-Chr1 28217621 28220511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01846 578 655 WRKY Transcription Factor Family AT4G12020 37.179 2.20e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01846 - - pvu:PHAVU_001G134400g 1160.21