Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01841 ATGGCCGATTATTTTGCCTTCGATATTGTTAACTCACTGCTAGGGAAGCTTGCTTCTTATGCTTATGAAGAAGCTTCTCAAGCCTACGGTTTGTATGAGGATGTGCAAGAGATCAAAGACACTTTGTCAATTGTGAAAGGTGTGTTGTTGGATGCCGAGGAGAAGAAAGAACATAATCAAGGCTTGCGCGAATGGCTAAGGCAGATCCAAAACGTTTGCGCCGATGCTGAAGATGTATTGGATGGATTTGAGTATCAAAGCTCTCGAAAGCAAGTTGTCAAAGCTTCAGGCAGCATCAGGGTGAAGGTAGACCATTTCTTTTCTTCATCTAATTCTCTTGTTTTTCGTCTTAAGATGGCTCATCAAATCAAAGATGTTAGGGAAAGATTGAATAAGATAGCAGCTGATGGGAACAAGTTTGGTCTTGAGAGGATTGATGTTGACAACAGACTTGTCCTAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCTGATGTGGTAGGAAGGGAGAGTGATAAGGAGGAAATTATTAAGCTTTTGATGCAACCTCACCCTCATGGTGATGGTTATGAAGATCAAAGTGTTCGTGTTATTCCCATAGTGGGTATTGGAGGGTTGGGGAAGACCACACTTGCCAAGTTGGTTTTCAATGATAAGAGGATGGATGATCTTTTCCAGTTGAAGATGTGGGTGTGTATCTCTGATGATTTTGACATAAGACAGATAATTATTAAAATCATCAACTCTGCTTCAGCTTCAGCTCCAACTATTGCTCTTGCTCACCAAGAAAACATCAACAGCTTAGATATTGATCAGCTGCAAAGTCGTCTTAGACACAAGCTTTCTGGTCAGAAGTATTTACTCGTGTTGGATGATATATGGAATGAAGATTATGCAAAATGGATAGAGTTGAAAAATTTAATAAAAGCTGGTGCGGTGGGAAGCAAAATCATAGTGACAACTCGAAGTAGCTCCATTGCTTCAATGATGGGCACCACTGCTCCATATATTTTAGAAGGACTTTCTCCACAGAATTGCTTATCCCTGTTTGTGAGATGGGCATTTAAGGATGGTAAAGAGAAGCAACATCCAGACCTAATGGAGATAGGAAAAGAAATTGTGAAAAAATGCTGCGGCGTTCCACTAGCAGTGAGAACCTTAGGAACTTCCCTCTTCTCTACTTCAGATATAGAGAAGTGGGAATTTGTTAGAGATCATGAGATATGGAATTTAAAGCAAAAGAGAGAAGATATCTTACCTGCACTTAAGTTGAGTTATGATCAAATGCCATTCCATTTGAAGCACTGTTTTGCTTACTTTTCCCTTTTTCCCAAAGATTTTCGTTTTATTAATACAGAAATTACAAATCTTTGGGCGTCACTTGGACTACTTCAATCCCCGAATGGAAGTCAAAAGGTGGACAAGATTGCAAGACAATATATAGAAGAGCTACATTCAAGATCTTTTCTTCAGGATTTCACTGACTATGGACTCTTCTATTTTTTCAACGTGCACGATTTGGTGCATGATCTTGCACTGTATGTTGCGAAGGAGGAGTTTCTGATGGTAGATTCACGTACGCAAAGTATACCAGAGCAAGTTAGGCACATTTCAACTGTTGAAACTGATTCTCTTGACAATACCTTGTTCCCCAAATCCAAAAGTCTGAGAACAATTATTTTTCCCGTTGAAGGAGTGGGTCTTGCGAGAGAAACTCTTCTGCAGACATGGTTATCAAGATACAGATACTTACGGATGTTAGATTTAAGTGATTCTTCTTTCGAGACGCTTCCAAATTCAATTTCTAAATTGGTGCATCTACGAGTTCTGGATCTTTCTAACAACCGCCAAATCAAAAGACTTCCTCATTCTATTTGCAAACTCCAGAAATTGCAAGTTTTCTCAGTCAGCGGATGCATGAAGCTTGAGGCATTGCCTAAAGGAATTGGGATGTTGAAGAACCTTCGAGAGCTGAAAATAACCACAAAGCAAGCTTTTCTGTCACAGGATGAAGTTGCAAAGTTGAGCAATCTTCAAATCCTGAGTTTTGAATATTGCGTGAACTTGAAGTTTGTGTTGGAAAAGGAAGAACTCACTCAGCTGAGTTCCCTTCAAATATTGGTTGTTCGATCATGTGGGAGCCTAGAGTCCTTACCCTTTTACATTCTGACTAAATTGGAGGCTCTCTTTGTGGCAGATTGTGAGAAGTTAAATTTGTTTTTTGATGAGGAAGGCGAATTCCAAAGACTGAGGATGAAGTTTCTGCATGTAGAGAATTTTCCGTGGCTAACTTTTCTTCCTGCATGGATCGAAGGAGCTGCAGATACTTTGCAGACCTTGATTATTCATAATCTGCCTATCCTTCATGTACTTCCTCCGTTTTTACCTAGAATGACTCATCTTAAGAGACTCCACATTTCTGAATGTCCTTCACTTCTCTTTCTTCCAACTGACTTTCATCGCCTCACTACCATTGAAGATTTGAGCTTAGATTCTACAACCGGAATCAATATTGTATAA 2523 0.3964 MADYFAFDIVNSLLGKLASYAYEEASQAYGLYEDVQEIKDTLSIVKGVLLDAEEKKEHNQGLREWLRQIQNVCADAEDVLDGFEYQSSRKQVVKASGSIRVKVDHFFSSSNSLVFRLKMAHQIKDVRERLNKIAADGNKFGLERIDVDNRLVLRREMTYSHVDASDVVGRESDKEEIIKLLMQPHPHGDGYEDQSVRVIPIVGIGGLGKTTLAKLVFNDKRMDDLFQLKMWVCISDDFDIRQIIIKIINSASASAPTIALAHQENINSLDIDQLQSRLRHKLSGQKYLLVLDDIWNEDYAKWIELKNLIKAGAVGSKIIVTTRSSSIASMMGTTAPYILEGLSPQNCLSLFVRWAFKDGKEKQHPDLMEIGKEIVKKCCGVPLAVRTLGTSLFSTSDIEKWEFVRDHEIWNLKQKREDILPALKLSYDQMPFHLKHCFAYFSLFPKDFRFINTEITNLWASLGLLQSPNGSQKVDKIARQYIEELHSRSFLQDFTDYGLFYFFNVHDLVHDLALYVAKEEFLMVDSRTQSIPEQVRHISTVETDSLDNTLFPKSKSLRTIIFPVEGVGLARETLLQTWLSRYRYLRMLDLSDSSFETLPNSISKLVHLRVLDLSNNRQIKRLPHSICKLQKLQVFSVSGCMKLEALPKGIGMLKNLRELKITTKQAFLSQDEVAKLSNLQILSFEYCVNLKFVLEKEELTQLSSLQILVVRSCGSLESLPFYILTKLEALFVADCEKLNLFFDEEGEFQRLRMKFLHVENFPWLTFLPAWIEGAADTLQTLIIHNLPILHVLPPFLPRMTHLKRLHISECPSLLFLPTDFHRLTTIEDLSLDSTTGINIV* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01841 840 Gene3D - 152 338 IPR027417 -
Phac1g01841 840 Pfam Rx N-terminal domain 9 99 IPR041118 -
Phac1g01841 840 Pfam NB-ARC domain 193 428 IPR002182 GO:0043531
Phac1g01841 840 Gene3D - 341 425 IPR042197 -
Phac1g01841 840 PRINTS Disease resistance protein signature 603 619 - -
Phac1g01841 840 PRINTS Disease resistance protein signature 198 213 - -
Phac1g01841 840 PRINTS Disease resistance protein signature 281 295 - -
Phac1g01841 840 PRINTS Disease resistance protein signature 378 392 - -
Phac1g01841 840 Gene3D - 426 515 IPR036388 -
Phac1g01841 840 PANTHER DISEASE RESISTANCE PROTEIN RP 49 807 IPR044974 GO:0006952
Phac1g01841 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 440 IPR027417 -
Phac1g01841 840 Gene3D - 9 124 - -
Phac1g01841 840 Gene3D Ribonuclease Inhibitor 518 838 IPR032675 -
Phac1g01841 840 FunFam Probable disease resistance protein At1g61300 153 336 - -
Phac1g01841 840 CDD RX-CC_like 6 134 IPR038005 -
Phac1g01841 840 ProSiteProfiles Leucine-rich repeat profile. 607 629 IPR001611 GO:0005515
Phac1g01841 840 SUPERFAMILY L domain-like 505 833 - -
Phac1g01841 840 Pfam Leucine rich repeat 584 640 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01841 Phac-Chr1 28091825 28094496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01841 196 720 WRKY Transcription Factor Family AT5G45050 21.622 4.38e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01841 - - gmx:100796004 1348.57