Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01840 ATGGCCGAATATTTTGTCTTTGATATTGCTGAATCACTGCTTAGAAAGCTTGCTTCTTTTGTTTGTGAAGAAGCTTCTCGTGTTTATGATGTGTATGAGGATGTCATAGGGATCAAAGATACTTTGTCAATTGTGAAAGGTGTGCTTTTGGATGCTGAGCATAAGAAGGAGCAGAGGCATGGGTTGCGTGAATGGCTCAGGCAGATTCAAAACGTTTGCCTAGATGCTGAAGATGTGTTGGATGGACTTGAGTGCCAAAATCTGAGAAAACAAGTTCTAAAAACTTCAGGCAGCACAAGGATGAAGGTAGATCACTTCTTTTCTTCATCTAATATTCTTGTTTTTCGTTTTCGGATGGCTCATCAAATCAAACATGTTAGGAGTAGATTTGATAAGATAGCAGCTGATGGAAACAAGTTTGGTCTTGAGAGGATTGAGGTTGACCACAGACTTGTGCAAAGGAGAGAACTGAGTTATTCCCATGTTGATGCTTCAGGGGTGATTGGAAGGGAGAGTGATAGGGAAGAAATTATAAAGCTTTTGATGCAACCTCACCTGCATGGTGATGGTTATGGAGATCAAAGTGTTTGTGTTATTCCCATAGTGGGTATTGGAGGGATGGGGAAGACCACACTTGCCAAGTTGGTTTTCAATGATAAGAGAATGGATGATCTTTTCCAGTTGAAGATGTGGGTGTGTATCTCTGATGACTTTGACTTACGACAGATAATTATTAAAATCATCAACTCTGCTTCAGCTTCAGCTCCAACTATTGCTCTTGCTCACCAAGAAAACATTAACAGGTTAGATATTGAGCAGCTACAAAGTCGTCTTAGACTAAAGCTTTCTGGTCAGAAGTATTTACTCGTGTTGGATGATATATGGAATGATGATCGTGCGAAATGGATAGAGTTGAAAGATTTAATAAAAGTTGGTGCGGTGGGAAGCAAAATTGTAGTGACAACACGAAGTAACTCAATTGCTTCAATGGTGGGCACTGTTCCATCGTATGTTTTAGAAGGTCTTTCCATGGAGAATTGTTTTTCTCTGTTTGTCAAATGGGCATTTAAGGAAGGCGAAGGAAAAAACTATCCAGATCTATTGGAGATTGGGAAAGAAATTGTGAAAAAATGTAGAGGGGTTCCACTGGCAGTACGAAGTTTAGGAAGTTCTCTGTTCCTAATTTTAGATTTAGAGAGGTGGGAATTTGTGAGAGACCATGAAATATGGAAGATAAAACAAAAGAAAGATGACATTTTACCTGCTCTTAAGTTGAGCTATGACCAAATGCCTTCCTATTTAAGGCACATTTTTGCTTTCTTTTCTCTTTATCCTAAAGATTATGGCTTTTCTAGTGCTGAAATTGTTGTTCTTTGGGAGTCACTTGGATTACTTCAATCTCCAGTTGGAAATCAAAAGCTTGAGAATATTGCAAGACAATATATTGATGAGTTACAAGCAAGATCATTGCTCGAAGATTTTGAGGACTTTGGCCACTATTACTATTTCAAAGTACATGATTTGGTACATGATCTTGCTCTGTATGTTGCCAAAGAGGAGCTTCTAATGGTAAACTCCCTAACTCGCTATATACCTGAGCAAATAAGGCATTTTTCAGTTGTTGACAATGATTCACTTAACCATGTTTTGTTCCCAAAATCCAGCAGTGTGAGAACTATATTATGTCCCCTAAAGGGAACCGGTATCGACAGTGAAACTCTTCTGCATACTTGGATAACAAGATACAAATACTTACGCTTTTTAGATTTAAGTGATTCCTCTTTCGAGACACTGCCTAATTCAGTTGCTAAATTGGAGCATCTGCGAACTCTCTTTTTAAATAACTGCAAAATAAAAAGATTTCCTAATTCTCTATGCAAACTCCATAATTTGAAATTTTTGTCTTTCAGAGGATGCATGGAGCTTGAAACACTGCCTAAAAGATTAGGGATGTTAATCAGCCTTCGGAAATTGTATATAACCACCAAACAATCTGTTCTGCCTGAGGATGAATTTGCAAGCTTGAGAAATCTGCATACTTTGAGTTTTGAATATTGTGGCAACTTGAAGTTTTTGTTCAGAAGGGAACAACTCACTTTCCTTGAAGTTTTGATCGTTCAATCATGTGGGAGCCTACAGTTATTACCTCTTCATAATCTCCCTAAACTGGAGGTTCTGTTTGTATCAAGGTGTGAGATGCTAAATTTGAACTGTGAAAGCCCAATCCACAGACTGAGGATGAAATTCCTGCATCTTGAGTATTGTCCGAAGTTGCATACATTGCCTCAATGGATTCAAGAATCAGTAGACACTTTGCGGACATTATTGATTTTGAATTGTGACACTCTTAAGATGTTTCCTAAGTGGCTCACAACAATGACTCGTCTTCAGATGCTCCATATTGTTAACTGTCCTAAACTGTTGTGTCTCCCAAGTGAAATGCATAGCCTCACTGCCCTTGATGATTTGACTATAGAGGGTTGTCCTGAATTGTGTCGAAAATGTGAGCCACAAAATGGTGAGTACTGGTCTTTCATCGCTCACATCAAACGCGTTTCCATTGGAGAAACAAGAAAAGGAAAACTCCTTTTTCGAATGCTGCAGCAGATGCGGTTAAGATTGCGCGATCAGTAA 2634 0.3869 MAEYFVFDIAESLLRKLASFVCEEASRVYDVYEDVIGIKDTLSIVKGVLLDAEHKKEQRHGLREWLRQIQNVCLDAEDVLDGLECQNLRKQVLKTSGSTRMKVDHFFSSSNILVFRFRMAHQIKHVRSRFDKIAADGNKFGLERIEVDHRLVQRRELSYSHVDASGVIGRESDREEIIKLLMQPHLHGDGYGDQSVCVIPIVGIGGMGKTTLAKLVFNDKRMDDLFQLKMWVCISDDFDLRQIIIKIINSASASAPTIALAHQENINRLDIEQLQSRLRLKLSGQKYLLVLDDIWNDDRAKWIELKDLIKVGAVGSKIVVTTRSNSIASMVGTVPSYVLEGLSMENCFSLFVKWAFKEGEGKNYPDLLEIGKEIVKKCRGVPLAVRSLGSSLFLILDLERWEFVRDHEIWKIKQKKDDILPALKLSYDQMPSYLRHIFAFFSLYPKDYGFSSAEIVVLWESLGLLQSPVGNQKLENIARQYIDELQARSLLEDFEDFGHYYYFKVHDLVHDLALYVAKEELLMVNSLTRYIPEQIRHFSVVDNDSLNHVLFPKSSSVRTILCPLKGTGIDSETLLHTWITRYKYLRFLDLSDSSFETLPNSVAKLEHLRTLFLNNCKIKRFPNSLCKLHNLKFLSFRGCMELETLPKRLGMLISLRKLYITTKQSVLPEDEFASLRNLHTLSFEYCGNLKFLFRREQLTFLEVLIVQSCGSLQLLPLHNLPKLEVLFVSRCEMLNLNCESPIHRLRMKFLHLEYCPKLHTLPQWIQESVDTLRTLLILNCDTLKMFPKWLTTMTRLQMLHIVNCPKLLCLPSEMHSLTALDDLTIEGCPELCRKCEPQNGEYWSFIAHIKRVSIGETRKGKLLFRMLQQMRLRLRDQ* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01840 877 SUPERFAMILY L domain-like 504 855 - -
Phac1g01840 877 Gene3D Ribonuclease Inhibitor 525 747 IPR032675 -
Phac1g01840 877 Gene3D Ribonuclease Inhibitor 748 839 IPR032675 -
Phac1g01840 877 Gene3D - 150 335 IPR027417 -
Phac1g01840 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 440 IPR027417 -
Phac1g01840 877 PRINTS Disease resistance protein signature 718 734 - -
Phac1g01840 877 PRINTS Disease resistance protein signature 378 392 - -
Phac1g01840 877 PRINTS Disease resistance protein signature 198 213 - -
Phac1g01840 877 PRINTS Disease resistance protein signature 281 295 - -
Phac1g01840 877 Pfam NB-ARC domain 193 428 IPR002182 GO:0043531
Phac1g01840 877 Gene3D - 426 515 IPR036388 -
Phac1g01840 877 PANTHER DISEASE RESISTANCE PROTEIN RP 63 828 IPR044974 GO:0006952
Phac1g01840 877 Gene3D - 341 425 IPR042197 -
Phac1g01840 877 Coils Coil 66 86 - -
Phac1g01840 877 Gene3D - 10 124 - -
Phac1g01840 877 Pfam Rx N-terminal domain 11 98 IPR041118 -
Phac1g01840 877 CDD RX-CC_like 12 134 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01840 Phac-Chr1 28069914 28073048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01840 199 831 WRKY Transcription Factor Family AT5G45050 22.610 3.54e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01840 - - gmx:100794422 1338.55