Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01838 ATGGCAGAGTGTTTTGTCTTTGATATTACTGAATCATTGCTAACCAAGCTAGCTTCTTATGTTTACGAAGAAGCTTCTCGAGCCTATGGTGTGCATGAGGATCTTCGAGGTATCAAAGACACCTTGTTAATAGTTAAAGGTGTGCTCTTAGATGCTGAGGAGAAGAAGGAACAAAACCATGGGTTGCGGGAATGGCTCAGGCAGATTCGAAACGTCTGCTTCGATGTTGAAGATGTGTTGGATGGACTTGAGTGCCAAAACCTGAGAAAGCAAGTTCTCAAAGCTTCAGGCAGCACAAGGACGAAGGTAGATCACTTTTTTTCTTCATCTAATTCTCTTTTTTTTCGTTTTAGGATGGCTCATCAAATCAAACATGTTAGGCGTAGATTTGATAAGATAGCAGCTGATGGAAACAAGTTTGGTCTTGAGAGGATTGAGGTTGACCACAGACTTGTGCAAAGGAGAGAAATGAGTTATTCCCATGTTGATGCTTCAGGGGTGATTGGAAGGGAGAGTGATAGAGAAGAAATTATTAAGCTTTTGATGCAACCTCACCCTCATGGTGATGGTTATGGAGATCAAAGTGTTTGTGTTATTCCCATAGTGGGTATTGGAGGGTTGGGGAAGACCACACTTGCCAAGTTGGTTTTCAATGATAAGAGAATGGATGATCTTTTCCAGTTGAAGATGTGGGTGTGTATCTCTGATGACTTTGACATAAGACAGATAATTATTAAAATCATCAACTCTGCTTCAGCTTCGGCTCCAACTATTGCTCTTGCTCACCAAGAAAACATTAAGAACTTTGATATTGAGCAGCTACAAAGTCGTCTTAGACTCAGGCTTTCTGGTCAGAAGTATTTGCTAGTCTTGGATGATATATGGAATGATAATCGAGCAAAATGGACAGAGTTGAAAGATTTAATTAAAGTGGGTGCAATTGGAAGCAAAATCTTGGTGACAACACGAAGTAATTCAATTGCTACAATGATGGGCACTGTTCCCTCGTATGTTTTGGAAGGTCTTTCCATGGAGAATTGTTATTCTCTGTTTAACAAATGGGCATTTAAGGAAGGCGAAGAAAATAAATATTCAAATCTAGTAGAGATTGGAAAAGAAATTGTGAAAAAATGTAGAGGGGTTCCACTAGCAGTACGAACTTTAGGAAGTTCTCTGTTCTTAAATTTTAATTTAGAAAGGTGGGAGTTTGTGAGAGACCATGGCATATGGAACTTAAAACAAGAAAAAGATGACATTTTACCTGCTCTTAAGTTGAGCTATGACCAAATGCCTTCCTATTTGAGACACTGTTTTGCTTTCTTTTCTCTTTATCCAAAAGATTATGGCTGTACTGGTGCTGAAATTGTTAATCTTTGGGCGGCATTTGGCTTACTTAGATCTGAGGTTGGAAGTCAAAAGATAGAGAATACTGCAAGACAGTATATAGACGAGTTACATTCGAGATCATTTCTTGAGGATTTTGAGGATTTTGGTCACCTTTACTATTTCAAAGTGCATGATTTGGTACATGATCTTGCCCAGTATGTTGCAAAAGAAGAGATTCTTGTGGTAAACTCAGGTACCCGGAATATACCTGAGCAAGTAAGGCATTTATCAGTTGTTGAAAATGATTCACTTAGCCATGCTTTGTTCCCCAAGTCCAGTAGTGTGAGAACTATATTATTTCCTACAGATGGAGTTGGTGTTGACAGTGTAGCTCTCTTGGATGCATGGATAACAAGATACAAATTCTTGCGTATATTAGATTTAAGTGATTCCTCTATTGAGACACTTCCCAATTCAATTGCTAAACTGGAGCATCTGCGAGCTCTCAGTCTTGAAAATAACCGCAACATAAAAAGACTTCCTCATTCTATATGCAAACTCCAAAATTTGCAAGCTTTGTCTTTGAGAGGATGTGTGGAGCTTGAAACATTGCCTAAAGGATTAGGGATGTTAATCAGCCTTCGAAAATTGTTTATCACCACAAAACAGTCTATTCTGCCAGAGGAGGAATTTGCAAGCTTGATGAATCTTCATACTTTGAGTTTTGAATTTTGTGACAATTTGATGTTTCTGTTCCGAGGGGCACCACAACTCACATCCCTTGAAATTTTGATTGTTCAATCATGTAGGAGGCTAGAGTCCTTTCCTTTTCATATTCTCCCTAAACTGGAGGTTCTGTTTGTCATAAGGTGTGAGATGCTAAATCTGTCCTTGAACTGTGAAAAACCAATCCACAGATTGAGGATGAAGTTTCTGCATATTGAGCAATGTCCAAGGCAACAGACATTGCCTCAATGGATTGAAGGAGCTGGCGACACTTTGCAGACATTGTTAATTTCAAATTGGCATGGTCTTGAGATGCTTCCTGAGTGGCTTACAGCAATGACTCGTCTTAAGATTCTTCATATTGTTAACTGTCCTCAGCTGTGTTATCTCCCGAGTGGCATGCATCGCCTCCGTGCCCTTGAAGATTTGACCATAGACGGTTGTTCCGAATTGTGTCGAAAATGTGAACCTCAATGTGGTGAGTACTGGTCCTTCATTGCTCACATCAAACACCTTTCCATTGGTGAAACAAGAGAAGGGAAACTCCTTTTCCAAATGCAGAAGCAGATTCGGTTGAACTTTCAGGATTTTTAA 2646 0.3949 MAECFVFDITESLLTKLASYVYEEASRAYGVHEDLRGIKDTLLIVKGVLLDAEEKKEQNHGLREWLRQIRNVCFDVEDVLDGLECQNLRKQVLKASGSTRTKVDHFFSSSNSLFFRFRMAHQIKHVRRRFDKIAADGNKFGLERIEVDHRLVQRREMSYSHVDASGVIGRESDREEIIKLLMQPHPHGDGYGDQSVCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFQLKMWVCISDDFDIRQIIIKIINSASASAPTIALAHQENIKNFDIEQLQSRLRLRLSGQKYLLVLDDIWNDNRAKWTELKDLIKVGAIGSKILVTTRSNSIATMMGTVPSYVLEGLSMENCYSLFNKWAFKEGEENKYSNLVEIGKEIVKKCRGVPLAVRTLGSSLFLNFNLERWEFVRDHGIWNLKQEKDDILPALKLSYDQMPSYLRHCFAFFSLYPKDYGCTGAEIVNLWAAFGLLRSEVGSQKIENTARQYIDELHSRSFLEDFEDFGHLYYFKVHDLVHDLAQYVAKEEILVVNSGTRNIPEQVRHLSVVENDSLSHALFPKSSSVRTILFPTDGVGVDSVALLDAWITRYKFLRILDLSDSSIETLPNSIAKLEHLRALSLENNRNIKRLPHSICKLQNLQALSLRGCVELETLPKGLGMLISLRKLFITTKQSILPEEEFASLMNLHTLSFEFCDNLMFLFRGAPQLTSLEILIVQSCRRLESFPFHILPKLEVLFVIRCEMLNLSLNCEKPIHRLRMKFLHIEQCPRQQTLPQWIEGAGDTLQTLLISNWHGLEMLPEWLTAMTRLKILHIVNCPQLCYLPSGMHRLRALEDLTIDGCSELCRKCEPQCGEYWSFIAHIKHLSIGETREGKLLFQMQKQIRLNFQDF* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01838 881 Gene3D - 150 336 IPR027417 -
Phac1g01838 881 Gene3D - 10 124 - -
Phac1g01838 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 440 IPR027417 -
Phac1g01838 881 Pfam Rx N-terminal domain 11 101 IPR041118 -
Phac1g01838 881 Gene3D - 341 425 IPR042197 -
Phac1g01838 881 Pfam NB-ARC domain 193 428 IPR002182 GO:0043531
Phac1g01838 881 PANTHER DISEASE RESISTANCE PROTEIN RP 63 828 IPR044974 GO:0006952
Phac1g01838 881 PRINTS Disease resistance protein signature 378 392 - -
Phac1g01838 881 PRINTS Disease resistance protein signature 281 295 - -
Phac1g01838 881 PRINTS Disease resistance protein signature 627 643 - -
Phac1g01838 881 PRINTS Disease resistance protein signature 198 213 - -
Phac1g01838 881 Gene3D Ribonuclease Inhibitor 512 878 IPR032675 -
Phac1g01838 881 Pfam Leucine rich repeat 585 640 IPR001611 GO:0005515
Phac1g01838 881 Gene3D - 426 511 IPR036388 -
Phac1g01838 881 CDD RX-CC_like 2 81 IPR038005 -
Phac1g01838 881 SUPERFAMILY L domain-like 504 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01838 Phac-Chr1 28046560 28049721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01838 199 835 WRKY Transcription Factor Family AT5G45050 22.687 3.28e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01838 - - gmx:100794422 1372.07