Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01837 ATGGCAGAGTGTTTTGTCTTTGATATTACAGAATCATTGCTAAGCAAGCTAGCTTCTTATGTTTACGAAGAAGCTTCTCGAGCCTATGGTGTGTATGAGGATCTTCGAGGTATCAAAGACACCTTGTTAATAGTCAAAGGTGTGCTCTTAGATGCTGAGGAGAAGAAGGAACAAAACCATGGGTTGCGGGAATGGCTCAGGCAGATTCGAAACGTCTGCTTCGATGTTGAAGATGTGTTGGATGGACTTGAGTGCCAAAACCTGAGAAAGCAAATTCTCAAAGCTTCAGGCAGCACAAGGACGAAGGTAGATCACTTCTTTTCTTCATCTAATTCTCTTGTTTTTCGTTTTAGGATGGCTCATCAAATCAAACATGTTAGGCGTAGATTTGATAAGATAGCAGCTGATGGAAACAAGTTTGGTCTTGAGAGGATTGAGGTTGACCACAGACTTGTGCAAAGGAGAGAAATGAGTTATTCCCATGTTGATGCTTCAGGGGTGATTGGAAGGGAGAGTGATAGAGAAGAAATTATTAAGCTTTTGATGCAACCTCACCCTCATGGTGATGGTTATGGAGATCAAAGTGTTTGTGTTATTCCCATAGTGGGTATTGGAGGGTTGGGGAAGACCACACTTGCCAAGTTGGTTTTCAATGATAAGAGAATGGATGATCTTTTCCAGTTGAAGATGTGGGTGTGTATCTCTGATGACTTTGACATAAGACAGATAATTATTAAAATCATCAACTCTGCTTCAGCTTCGGCTCCAACTATTGCTCTTGCTCACCAAGAAAACATTAAGAACTTTGATATTGAGCAGCTACAAAGTCGTCTTAGACACAGGCTTTCTGGTCAGAAGTATTTGCTAGTCTTGGATGATATATGGAATGATAATCGTGTAAAATGGACAGAGTTGAAAGATTTAATTAAAGTGGGTGCAATTGGAAGCAAAATCTTGGTGACAACACGAAGTAATTCAATTGCTACAATGATGGGCACTGTTCCCTCGTATGTTTTGGAAGGTCTTTCCATGGAGAATTGTTATTCTCTGTTTAACAAATGGGCATTTAAGGAAGGCGAAGAAAAAAAATATTCAAATCTAGTAGAGATTGGAAAAGAAATTGTGAAAAAATGTAGAGGGGTTCCACTAGCAGTGCGAACTTTAGGAAGTTCTCTGTTCTTAAATTTTAATTTAGAAAGGTGGGAGTTTGTGAGAGACCATGGCATATGGAACTTAAAACAAGAAAAAGATGACATTTTACCTGCTCTTAAGTTGAGCTATGACCAAATGCCTTCCTATTTGAGACACTGTTTTGCTTTCTTTTCTCTTTATCCAAAAGATTATGGCTGTACTGATGCTGAAGTTGTTAACCTTTGGATGGCACTTGGCTTACTTAGATCTGAGGTTGGAAGTCAAAAGATAGAGAATACTGCAAGACAGTATATAGACGAGTTACATTCGAGATCATTTCTTGAGGATTTTGAGGACTTTGGTAACCTTTACTATTTCAAAGTGCATGATTTGGTACATGATCTTGCCCAGTATGTTGCAAAAGAAGAGATTCTTGTGGTAAACTCAGGTACCCGTAATATACCTGAGCAAATAAGGCATTTATCAGTTGTTGAAAATGATTCACTTAGCCATGCTTTGTTCCCCAAGTCCAGTAGTGTGAGAACTATATTATTTCCAATAGTTGGAGTTGGTGTTGACAGTGTAGCTATTTTGGATGCATGGATAACAAGATACAAATTCTTGCGTTTATTAGATTTAAGTGATTCCTCTATTGAGACACTTCCCAATTCAATTGCTAAACTGGAGCATCTGCGAGCTCTCAGTCTTGAAAATAACCGCAACATAAAAAGACTTCCTCATTCTATATGCAAACTCCAAAATTTGCAAGCTTTGTCTTTGAGAGGATGTGTGGAGCTTGAAACATTGCCTAAAGGATTAGGGATGTTAATCAGCCTTCGAAAATTGTTAATCACCACAAAACAGTCTATTCTGCCAGAGGAGGAATTTGCAAGCTTGATGAATCTTCATACTTTGAGTTTTGAATTTTGCGACAATTTGATGTTTCTGTTCCAAGGGGCACAACAACTCACATCCCTTGAAATTTTGATTGTTCAATCATGTAGGAGGCTAGAGTCCTTTCCTTTTCATATTCTCCCTAAACTGGAGGTTCTGTTTGTCATAAGGTGTGAGATGCTAAATCTGTCCTTGAACAGTGAAAAACCAATCCACAGATTGAGGATGAAGTTTCTGCATATTGAGCAATGTCCAAGGCAACAGACATTGCCTCAATGGATTGAAGGAGCTGGCGACACTTTGCAGACATTGTTAATTTCAAATTGGCATAGTCTTGAGATGCTTCCTGAGTGGCTTACAGCAATGACTCGTCTTAAGATTCTTCATATTGTTAACTGTCCTCAGCTGTGTTATCTCCCGAGTGGCATGCATCGCCTCCGTGCCCTTGAAGATTTGACCATAGACGGTTGTTCCGAATTGTGTCGAAAATGTGAACCTCAGTGTGGTGAGTACTGGTCCTTCATTGCTCACATCAAACACCTTTCCGTTGGTGAAACAAGAGAACGGAAACTCCTTTTCCAAATGCAGAAGCAGATTCGGTTGAAACTTCAGATATAA 2643 0.3935 MAECFVFDITESLLSKLASYVYEEASRAYGVYEDLRGIKDTLLIVKGVLLDAEEKKEQNHGLREWLRQIRNVCFDVEDVLDGLECQNLRKQILKASGSTRTKVDHFFSSSNSLVFRFRMAHQIKHVRRRFDKIAADGNKFGLERIEVDHRLVQRREMSYSHVDASGVIGRESDREEIIKLLMQPHPHGDGYGDQSVCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFQLKMWVCISDDFDIRQIIIKIINSASASAPTIALAHQENIKNFDIEQLQSRLRHRLSGQKYLLVLDDIWNDNRVKWTELKDLIKVGAIGSKILVTTRSNSIATMMGTVPSYVLEGLSMENCYSLFNKWAFKEGEEKKYSNLVEIGKEIVKKCRGVPLAVRTLGSSLFLNFNLERWEFVRDHGIWNLKQEKDDILPALKLSYDQMPSYLRHCFAFFSLYPKDYGCTDAEVVNLWMALGLLRSEVGSQKIENTARQYIDELHSRSFLEDFEDFGNLYYFKVHDLVHDLAQYVAKEEILVVNSGTRNIPEQIRHLSVVENDSLSHALFPKSSSVRTILFPIVGVGVDSVAILDAWITRYKFLRLLDLSDSSIETLPNSIAKLEHLRALSLENNRNIKRLPHSICKLQNLQALSLRGCVELETLPKGLGMLISLRKLLITTKQSILPEEEFASLMNLHTLSFEFCDNLMFLFQGAQQLTSLEILIVQSCRRLESFPFHILPKLEVLFVIRCEMLNLSLNSEKPIHRLRMKFLHIEQCPRQQTLPQWIEGAGDTLQTLLISNWHSLEMLPEWLTAMTRLKILHIVNCPQLCYLPSGMHRLRALEDLTIDGCSELCRKCEPQCGEYWSFIAHIKHLSVGETRERKLLFQMQKQIRLKLQI* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01837 880 FunFam Probable disease resistance protein At1g61300 150 335 - -
Phac1g01837 880 Pfam Leucine rich repeat 585 640 IPR001611 GO:0005515
Phac1g01837 880 Pfam Rx N-terminal domain 11 100 IPR041118 -
Phac1g01837 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 440 IPR027417 -
Phac1g01837 880 Gene3D - 10 124 - -
Phac1g01837 880 CDD RX-CC_like 2 134 IPR038005 -
Phac1g01837 880 Gene3D Ribonuclease Inhibitor 774 845 IPR032675 -
Phac1g01837 880 Gene3D Ribonuclease Inhibitor 571 773 IPR032675 -
Phac1g01837 880 Gene3D - 426 515 IPR036388 -
Phac1g01837 880 Gene3D - 341 425 IPR042197 -
Phac1g01837 880 FunFam Probable disease resistance protein At1g63360 427 515 - -
Phac1g01837 880 PRINTS Disease resistance protein signature 378 392 - -
Phac1g01837 880 PRINTS Disease resistance protein signature 698 714 - -
Phac1g01837 880 PRINTS Disease resistance protein signature 281 295 - -
Phac1g01837 880 PRINTS Disease resistance protein signature 198 213 - -
Phac1g01837 880 PANTHER DISEASE RESISTANCE PROTEIN RP 54 828 IPR044974 GO:0006952
Phac1g01837 880 Gene3D - 150 336 IPR027417 -
Phac1g01837 880 SUPERFAMILY L domain-like 504 847 - -
Phac1g01837 880 Pfam NB-ARC domain 193 428 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01837 Phac-Chr1 28032249 28034891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01837 199 835 WRKY Transcription Factor Family AT5G45050 23.767 5.04e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01837 - - gmx:100794422 1379.39