Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01809 ATGGCTTCGTCTTCCTCCGATCCCGGAAAGTCCGCGGAGACGTCGGAAGTGGCGGTGGCAACCGATCAGCTCTTACTCTACCGAGGATTGAAGAAAGCGAAGAAGGAAAGAGGTTGCACTGCCAAAGAGCGCATCAGCAAAATGCCTCCCTGCGCTGCTGGAAAACGCAGCTCAATTTACCGCGGTGTCACCAGGCATAGGTGGACTGGTCGTTATGAAGCGCATCTCTGGGATAAGAGTACGTGGAATCAGAATCAGAATAAGAAGGGAAAACAAGGGGCATATGATGACGAGGAAGCAGCTGCTAGAGCTTATGATCTTGCTGCTCTCAAATACTGGGGTCCAGGGACTCTCATTAACTTTCCAGTGACTGACTATACAAGAGATCTTGAAGAAATGCAGAATGTGTCGAGAGAAGAGTACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCTAGAGGACTATCAAAATATCGTGGACTCTCCAGTCGATGGGAATCGTCATATGGCCGCATGTCTGGATCTGATTACTTCAATAGCATGCATTATGGTGCAGGGGATGATTCAGCAGCAGAAAGTGAATATGTCAGTGGTTTCTGCATAGAAAGAAAGATTGATTTAACAAGTCACATCAAATGGTGGGGATCTAATAAGACTCGACATTCTGACTCTGGTACAAGATTATCAGAAGAAAAAAAACTTGGTTCTGCTGGAGATATTTGCAGTGAACTAAAGCAATTGGAACAGAAAGTTCAACCTACAGAACCTTATCAGATGCCACAGTTAGGCAGGCCACACAACGAGAAAAAGCAAAGAAGTTCTTCGGTCTCTGCCTTAAGAATCCTTTCACAATCTGCTGCTTACAAGAGCTTACAAGAGAAAGCGTCAAAGAGACAGGAAAATAGTATTGATAACGATGAGAATGAAAACAAAAATACAGTCAACAAATTGGATCATGGAAAGGCAGTTGAGAAACCATCAAATCATGATGGAGGCAATGATCGGCTTGACATTGCAATGGGAATGAGTGGGACAATGCCTCTTCAAAGAAATGTCTATCCTTTGACACCATTCTTGTCTGCACCACTTTTGACAGCTTACAATACTGTTGATCCAATGGTAGATCCTGTTCTCTGGACGTCTCTTGTTCCCGTACATCCTGCTGGCCTTTCTCGTACGACTGAGGTTACCAAGACAGAGACCAGTTCATCATACACAATGTTTCAGCCAGAGGAATGA 1242 0.4452 MASSSSDPGKSAETSEVAVATDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGLSKYRGLSSRWESSYGRMSGSDYFNSMHYGAGDDSAAESEYVSGFCIERKIDLTSHIKWWGSNKTRHSDSGTRLSEEKKLGSAGDICSELKQLEQKVQPTEPYQMPQLGRPHNEKKQRSSSVSALRILSQSAAYKSLQEKASKRQENSIDNDENENKNTVNKLDHGKAVEKPSNHDGGNDRLDIAMGMSGTMPLQRNVYPLTPFLSAPLLTAYNTVDPMVDPVLWTSLVPVHPAGLSRTTEVTKTETSSSYTMFQPEE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01809 413 MobiDBLite consensus disorder prediction 291 336 - -
Phac1g01809 413 MobiDBLite consensus disorder prediction 252 277 - -
Phac1g01809 413 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Phac1g01809 413 PRINTS Ethylene responsive element binding protein signature 104 124 IPR001471 GO:0003700|GO:0006355
Phac1g01809 413 FunFam AP2-like ethylene-responsive transcription factor 58 124 - -
Phac1g01809 413 SUPERFAMILY DNA-binding domain 58 123 IPR016177 GO:0003677
Phac1g01809 413 Coils Coil 297 317 - -
Phac1g01809 413 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 23 299 - -
Phac1g01809 413 SMART rav1_2 59 128 IPR001471 GO:0003700|GO:0006355
Phac1g01809 413 MobiDBLite consensus disorder prediction 294 333 - -
Phac1g01809 413 Pfam AP2 domain 59 114 IPR001471 GO:0003700|GO:0006355
Phac1g01809 413 Gene3D AP2/ERF domain 59 124 IPR036955 GO:0003700|GO:0006355
Phac1g01809 413 ProSiteProfiles AP2/ERF domain profile. 59 122 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01809 Phac-Chr1 27815985 27819884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01809 17 397 AP2-EREBP Transcription Factor Family AT2G41710 64.194 1.02e-162 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g01809 AP2 2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01809 K09285 - gmx:100786651 764.222