Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01804 ATGGAAGCATCAAGTGATAAAGGGTTGTTGTTGGAATGTGGAAGGAAGTGCAGTCCACCTCCATTTTTGTTGAAGACCTACATGCTTGTGGAAGATCCGGCCACCGACGCCGTCGTGTCGTGGAATGCCGACGGAACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCTCGTGATCTCCTCCCAACACTTTTCAAGCACAGCAACTTCTCTAGTTTTGTACGCCAGCTAAATACTTACGGCTTTCGTAAAGTTGCAACAAGTAGATGGGAGTTTTTCAATGACAGGTTCAAGAAAGGTGAAAGAGAACAGCTATATGAGATTCGGCGAAGAAAAGCTTGGACCAACAAGCAACAACCTAATGTACCAAACCAAGCCACACCTCAAGATTCTGATGAAGATCAAAGGTCCTCATCAACTTCATCATCTTCTGGCTACACTACTCTGGTGGATGAAAACAAGAGGCTTAAGAAGGAGAATGGAGTGCTGAACTCTGAGCTCAGAAGCATGAAAAGAAAGTGTAAGGAACTGCTTGATTTGGTGACCAAATATTCATCAGATGCAAAAGAAAAGGAAGAAGATGAAAGGCCAATGCTGTTTGGAGTGAGGCTAGATGTTGAAGGAGGGAGGGAGTTGAAGAGGAATAGAGCTAAGATAAGTGAAAGCGCAAGCGTTATGCTCTCTCAGTCATGCAAATAA 699 0.4506 MEASSDKGLLLECGRKCSPPPFLLKTYMLVEDPATDAVVSWNADGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDRFKKGEREQLYEIRRRKAWTNKQQPNVPNQATPQDSDEDQRSSSTSSSSGYTTLVDENKRLKKENGVLNSELRSMKRKCKELLDLVTKYSSDAKEKEEDERPMLFGVRLDVEGGRELKRNRAKISESASVMLSQSCK* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01804 232 Coils Coil 153 173 - -
Phac1g01804 232 MobiDBLite consensus disorder prediction 112 151 - -
Phac1g01804 232 ProSitePatterns HSF-type DNA-binding domain signature. 61 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g01804 232 FunFam Heat stress transcription factor B-4 14 112 - -
Phac1g01804 232 Pfam HSF-type DNA-binding 22 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g01804 232 MobiDBLite consensus disorder prediction 115 150 - -
Phac1g01804 232 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 181 IPR027725 -
Phac1g01804 232 SMART hsfneu3 18 111 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g01804 232 SUPERFAMILY "Winged helix" DNA-binding domain 18 111 IPR036390 -
Phac1g01804 232 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g01804 232 PRINTS Heat shock factor (HSF) domain signature 60 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g01804 232 PRINTS Heat shock factor (HSF) domain signature 22 45 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac1g01804 232 Gene3D - 14 112 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01804 Phac-Chr1 27695993 27698582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01804 19 205 HSF AT2G41690 55.556 9.01e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac1g01804 HSF_DNA-bind 1.5e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01804 K09419 - gmx:100802739 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01804 1 27695993 27698582 Phac1g01804 1 27695993 27698582 ECH