Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01797 ATGGAGGAAGAAAACAGGTCTGCTACCAAAATGGAGTTGCAGACAAAGGAAGGTATTGCAGTGGAGAATAAGAGGAGAGTGTGTTTGGTTTGGGAAGATTTGACAGTGGTGACATCAAATGGTAGAAAAAGTGCAGAAAAGGAACTGTTAAAAGGGTTAACTGGTTATGCAGAACCCAACCGGATTATGGCACTCATTGGTCCTTCAGGATCTGGGAAATCAACTTTACTTGCTGCACTCGCTGGAAAATTCGCTCCAAATGTGGAAGTGACAGGGAACATTCTACTCAATGGGAAGAAGAAAAACTTGAATTCCAGAGATGTGTCCTTTGTTGCTCAAGAGGAACTTTACTTGGGAACTTTGACGGTAAAAGAGACCCTCACATTCTCTGCAAACATGAGGCTTCCTTCCAAAATGACCAAAGAAGAGATAAACAAAGTGGTGGAAGAAACCATAATGGAAATGGGTCTGGAAAATTGTGCGGATACAAGGATTGGGAATTGGCATTGTAGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAGATTTTAACACAACCCCATATCTTACTTCTTGATGAACCTACTACTGGCCTAGACAGTGCCTCAGCTTTCTATGTGATTCAATCACTGTGCCACATTGCTCACAATGGAAAGATAGTTATCTGTTCCATTCACCAACCCAGTAGTGAGATTTTTGATCTATTTCATGATTTGCTTTTGCTTTCAAGTGGGGAAACTGTTTATTTTGGACAAGCAAAGAAGGCTCTTAAGTTTTTTGCCGATGCAGGGTTTCCCTGTCCTACTAGAAGAAATCCTTCAGATCATTTCCTTATGTGTATTAATTTGGACTTTGATTTTATTACTGAAGTACTAGAGAGGACACAATTATGTTTGACATCATCACAGTCAACAATGGGAATGAGAAAATCAGAGATCAGAAGTACACTGATTGAGAGTTACAAAAGTTCAAAGTTAATGTTCAATGCAAGAAGCAAAATCCAGCAACTGAAACTCAATGAAGAACAAGGAATTAAACCCTACATAGGTAGCACTACCACGTGGAGGAAGCAATTGTGTACATTGACCAAGCGATCTTTCCTAAACATGACTAGGGACATTGGTTACTACTGGCTGAGGATAATATTCTACATAATGGTAGGAATCAGTATTGGCACCCTCTTTTTTCACATTGGCACAGAAAACAACTCAATCTTGGCTAGAGCAAAGTGTGTATCATTCATCTATGGGTTCATGATTGTTCTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGGTGTTCTATGGTGAAAGGTCCAAAGGGCACTATGGAGAGGCTGTCTTTGTAGTATCAAACATCATATCATCATTCCCTTTCCTTGTTCTAACATCTCTTTCCTCCGGAACAATCATTTACTTCATGGTGCAATTTCATCCGGGTTTAACTAATTGTGCATTTTTCTGTATCAACTTATTCTGCTGCCTATCTGTGGTTGAGTGTTGCATCATGGTTGTAGCCTCACTGGTCCCCAATGTGCTGATGGGCATAGGAACAGGAACTGGTGTAATTATCTTCATGATGATGCCCTCCCAGATATTCAGATCATTACCTGAGCTTCCAAAGTTCTTTTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTGCTTGGGCAGTGCAGGGACAATACAAGAATGACATGCTGGGGGTTGAATTTGATCCTTTGCTACCCGGTGATGCGAAGGTCAGTGGAGAAAAAGTTCTATCATTGATACTTGGGGTTCCATTGAATCATAACAAATGGTGGGACTTAACAGCATTGGCTACCATACTGTTAGTTCACAGATTGGTTCTTTACTTGGTGCTTCGTTTTGTCAAAAGAGCTAAATCACCTTCTCTGTGGTTCTGTGCCAAGAAAAGTCTACACTGTTTGCTAAATAACAAGTCTTCTATCTCTTCCAGGAAACTAGCTCAGCCTCCATTATCGTCTCAAGAGGGTCTTATGTCCCCGAACCTTGCAATGTAA 2043 0.4072 MEEENRSATKMELQTKEGIAVENKRRVCLVWEDLTVVTSNGRKSAEKELLKGLTGYAEPNRIMALIGPSGSGKSTLLAALAGKFAPNVEVTGNILLNGKKKNLNSRDVSFVAQEELYLGTLTVKETLTFSANMRLPSKMTKEEINKVVEETIMEMGLENCADTRIGNWHCRGISNGEKKRLSIGLEILTQPHILLLDEPTTGLDSASAFYVIQSLCHIAHNGKIVICSIHQPSSEIFDLFHDLLLLSSGETVYFGQAKKALKFFADAGFPCPTRRNPSDHFLMCINLDFDFITEVLERTQLCLTSSQSTMGMRKSEIRSTLIESYKSSKLMFNARSKIQQLKLNEEQGIKPYIGSTTTWRKQLCTLTKRSFLNMTRDIGYYWLRIIFYIMVGISIGTLFFHIGTENNSILARAKCVSFIYGFMIVLSCGGLPFFIEELKVFYGERSKGHYGEAVFVVSNIISSFPFLVLTSLSSGTIIYFMVQFHPGLTNCAFFCINLFCCLSVVECCIMVVASLVPNVLMGIGTGTGVIIFMMMPSQIFRSLPELPKFFWRYPMSYLSFAAWAVQGQYKNDMLGVEFDPLLPGDAKVSGEKVLSLILGVPLNHNKWWDLTALATILLVHRLVLYLVLRFVKRAKSPSLWFCAKKSLHCLLNNKSSISSRKLAQPPLSSQEGLMSPNLAM* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01797 680 Pfam ABC-2 type transporter 230 283 IPR043926 GO:0140359
Phac1g01797 680 Gene3D - 18 267 IPR027417 -
Phac1g01797 680 Pfam ABC-2 type transporter 362 567 IPR013525 GO:0016020|GO:0140359
Phac1g01797 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 265 IPR027417 -
Phac1g01797 680 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 273 IPR003439 GO:0005524
Phac1g01797 680 Pfam ABC transporter 51 200 IPR003439 GO:0005524
Phac1g01797 680 SMART AAA_5 59 258 IPR003593 GO:0016887
Phac1g01797 680 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 17 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01797 Phac-Chr1 27567333 27573525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01797 48 266 Calmodulin-binding Proteins AT2G36910 25.664 2.88e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01797 K05681 - gmx:100802207 1074.31