Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01761 ATGGCATCGGTGCGTGATGCTCCGGCATGGAAGTTCCACGTGTTTCTGAGCTTCAGAGGAGAGGACACGCGGAACGGTTTTACGGACCACCTCTACGCTGCGTTTAGGGGACGCGGCTTTGCCGTTTTCAGAGACAACGAAGAGCTTGAGAGAGGAGAAGTCATCGCGCACGCGCTCCTGAAGGCGATCGATGAGTCTCTGTGTTCCGTGGTGGTTATCTCGCCGCGCTACGCCTCTTCGCGGTGGTGCTTGGACGAGCTCCTCAGGATTCTGGAATCACGAGCGAAGTTCGGTCGCAACGTTCTGCCGATCTTTTACAACGTGGATCCCTCAGACGTAAGGCATCAACGAGGAACTTTCTCCGAAGCTTTTGCGAAGCATGCGGAGAGGTTTGGAAGCGATGAGATTCGGATGTGGAGAGAAGCGTTGAAGGTCGTTGCGGATTTGGCTGGCTGGACCTCTAAAGACAAGCGTGAAACAGAACTCATTGAAGAAATTGTTGCAGATGTGTGGGAAAAGTTACAACCTAAATTGCCATCCTATGATGATGAACTGGTTGGAATTGATTCTAGGATAAAAAGGATTTATGCACTTTTAAGAACGGAATCAGAGGAAGTTCGCTTTATGAGGATATGGGGCATGGGTGGTATTGGAAAGACAACATTAGCTAAGTTTGTCTATAATAAAATCCATGACCAATATGATATTAGTTGCTTTCTTGAGAATGTTAGAGAGGTTTCGAGTGAAAGAGATGGTCTGCTTTGCTTACAAAGAAAATTGCTTTCCCATTTAAGAATAAGAAGCATGAGAATTGAAAGCTTGGACCAAGGAAAGGAAACATTACGGAGTCTTTTATTCAATAAGAAAGTTCTCCTTGTCCTTGATGATTTAAGTTCTGATATCCAAGTAGAGAATTTAGCTGGGAAGCCAGAATGGTTTGGTCAAGGGAGTAGAGTAATTATAACAACTAGAGATAAGCATCTACTTAAATCATTTCATGTGTGTGAGAATTATGATGTTCAGATCTTAAATAGGGATGAATCCCTTCAACTCCTTTGCCAAAAAGCGTTTAGAGGAGAAAAGCCTGAAGAAGCTTACTTAGAGTTGTCTAGTTCTGTGGTTCAATATGCTGGAGGTGTTCCTTTGGCACTCAAAGTGTTGGGTTCATTTCTCTGTGGAAGAAGTGCTTCCGTATGGGAAGACGCTTTGAAAATGTTAAGGAAGGATGTTCAAAATGATATTTGTAAGACTTTAAGAATAAGTTATGATGGATTACGAGATAACGAGAAGGCTATACTTCTAGATATTGCTTGTTTTTTCAAAGGAAACACCAAAGATGATGTAACACGAATATTGGAAAATTGTGATTTCAATCCACTGATTGGTATAGAAGTTCTAGTTGAAAAATCATTAGTAACTTACGATGGATTGCATTTGGGGATGCACGATTTGCTTCAAGAAATGTGTAGGAATATTGTTCTCCAAGAATCTCCTAATGATGCCAGCAAGAGAAGTAGGTTGTGGTCACTCAAGGACATTGATCAAGTATTGAGAAATAATAATGGAACTGAATCCACTCAAGCTGTAGTTTTAAATCTGCCTGAGCCTTATGAAGCATGTTGGAATCCGGACGCTTTCTCAAAAATGAGTAATCTTAGATTGCTCATGATATTGAATAAATTGCAACTTCCGCTTGGCCTCAAATGTCTTCCCAGTGGATTAAAAGTTCTTGTATGGAAGGAATATCCTCTTGAATCACTGCCAGTTGGAGCCCAACTGGATGAACTCGTTGAACTTGATATGTCTAATAGCCAAATAAAACACCTTTGGGGAGGAACAAAGGCTTTGGAATCTTTAAATGCAAGCGAGACTGCTATTAGGGAAGTGCCTTCATCCATTGTTCTTTTAAAAAATCTCAGACTGCTTTTATTTCGTGGATGCAAAGGCCTAACATCAAACTCATGGAGCTCACTTCTCCCTTTTGAGAAGATTCTCAGGTTTAATAGTCATCCAACTCCAAAGAGATTGATCTTGCCTACTTTTTCTGGTCTATCCTCATTGAAGAAACTGGACTTTAGTTATTGCGATCTCCATGATGGGTCAATTCCTGAAGATCTTGGCTGCTTGTCATCATTGGTAACATTAGATCTAAGTGGGAACAATTTTGTACGCTTACCTGGTTGCATCTCTGAACTTTTGAAGCTAGAAAAACTATTATTGAAGTGCTGCCCAAGCTTGGAGTCATTTCCTAAGCTGCCACCAGAAGTACATTATGTAAATGCAAGTGATTGTGGTTCAATGAAACCGTTATCGGATCCGCAAGAGATATGGGGTCATTTGGCATCATTTGCCTTTGACAAGTTGCAAGATGTCAATCAGTTTAAAACCTTATTGGTAAGTCCAGGAAACGAAATTCCATCATCTTTTTTCTATCAAAAGCATCTCAACCAAGTCCAAGACATAGAATACTTGAAAGAAAACTACATTTGGGCTGACTCCACTGTGTCAATATCGATGGACTTAGCTCAACTTCGTCACCGGTATCATAGAAGTGAATGGTGGGGACTTTTGGTTTGCCTAGTTGTAGAAGATGTGGAGCCTTCACCTTCACAGGAATATCGCATTGGTTGGACTTCAAAAGTTCCTAGATTCAAAAATATTTTGCAGCAGCTGTGCCACAAGATGGAGCAGGGGCTCATCACTGGAATCCCAAATCATAAATATCCTCACCTGTTGATTTTATATATTCCGTTCTATTCGGCGCGCTGGTTTTATGTTCATGACAAGCTTCAATTAATATTTTATTGTTCTAGTCTCAAGAGCAGATTAGTGATAAAGAAATGTGGATGGCGAATATTATGTAAGGAAGATGCTGAAAACTGGCGCAGCAAACTGTCTGAATGCAACACTAATTCCTCCGATCAATGTGTTTCAAATCCAAGGGGCGGTTGCTTATCTCCGCACTTTTCATCTTGGAGATGGATATCTCGTCTCAAGGTTCCCCAACACTGCAAAACTTTCCTCTTGGCTATCCTCTGTGATCGCTTGCCTGCTAATGAAAGGTGCACATTCTGCTGCTTGGAAGGGACTGCCATCCATGTTTTACGAGACTGTACAAGAGCTACTGCAATCTGGGTTCAAATGGTTCCTCCAGAGGTGTGTGATCAGTTTTTTTCAACATCTCTTCATGACTGGATGCACAGGTTCCTTCAGAAGCCCTGGTTTCCCAACAGGGACTATTATGCTGACTGTTTGAGGTTTACTGTCACGACTTGGCTGCTTTGGAAGGATAGAAATAGTTCCATCTTCAAGCGAAATTCTCCAACAGATAATGATGGGTTGTATTCTCTGATTCAGTCTCTAGTAAAAGAATATTTAATGCTTTTGCATCTAAAAGGGGAAGAGGGTACTTCTTCTGCGAATTCTCTTTCCCAGAACTCTCGTCTAAAACTTTTTATCAAGCTGAACGTGGATGGCTGTTGCAATGACAATCCTGGAAATGCTGGTTATGGGGGTCTCTTTCGTGACGTAGAGGGGAAGTGGCTTGGTGGGTTCTATGGATCTCTTGGCCTTGCAACGAATGTGAAAGCTGACCTTTTTGCCATTTGTCAGGGTTTGATCACAGCTTGGGATTTGGGTTACAGAACCGTGCTGGTTGAAACTGATTCATTAGAAGCAATAAATCTCATTAAGGAGGCCAACATTGAGGACTGTGCCTATGGTGACTTGCTTGCTGACATACGCTCCCTCATGCAAAGAAATTGGTCCTTGGACTTGATCCATTCTCTTAGACAAGATAATGCATGTGCAGACATTTTATCAAAGCTTGGAGCTGAGCAGCATGAGGTCTATTGCTTCCTGGCTCATCCACCGCAGCAACTTCAGCTGGCATTGGTGGCTGATGCCCTGCAAGTTCAAATTCCTTGCCTGTAG 3933 0.4198 MASVRDAPAWKFHVFLSFRGEDTRNGFTDHLYAAFRGRGFAVFRDNEELERGEVIAHALLKAIDESLCSVVVISPRYASSRWCLDELLRILESRAKFGRNVLPIFYNVDPSDVRHQRGTFSEAFAKHAERFGSDEIRMWREALKVVADLAGWTSKDKRETELIEEIVADVWEKLQPKLPSYDDELVGIDSRIKRIYALLRTESEEVRFMRIWGMGGIGKTTLAKFVYNKIHDQYDISCFLENVREVSSERDGLLCLQRKLLSHLRIRSMRIESLDQGKETLRSLLFNKKVLLVLDDLSSDIQVENLAGKPEWFGQGSRVIITTRDKHLLKSFHVCENYDVQILNRDESLQLLCQKAFRGEKPEEAYLELSSSVVQYAGGVPLALKVLGSFLCGRSASVWEDALKMLRKDVQNDICKTLRISYDGLRDNEKAILLDIACFFKGNTKDDVTRILENCDFNPLIGIEVLVEKSLVTYDGLHLGMHDLLQEMCRNIVLQESPNDASKRSRLWSLKDIDQVLRNNNGTESTQAVVLNLPEPYEACWNPDAFSKMSNLRLLMILNKLQLPLGLKCLPSGLKVLVWKEYPLESLPVGAQLDELVELDMSNSQIKHLWGGTKALESLNASETAIREVPSSIVLLKNLRLLLFRGCKGLTSNSWSSLLPFEKILRFNSHPTPKRLILPTFSGLSSLKKLDFSYCDLHDGSIPEDLGCLSSLVTLDLSGNNFVRLPGCISELLKLEKLLLKCCPSLESFPKLPPEVHYVNASDCGSMKPLSDPQEIWGHLASFAFDKLQDVNQFKTLLVSPGNEIPSSFFYQKHLNQVQDIEYLKENYIWADSTVSISMDLAQLRHRYHRSEWWGLLVCLVVEDVEPSPSQEYRIGWTSKVPRFKNILQQLCHKMEQGLITGIPNHKYPHLLILYIPFYSARWFYVHDKLQLIFYCSSLKSRLVIKKCGWRILCKEDAENWRSKLSECNTNSSDQCVSNPRGGCLSPHFSSWRWISRLKVPQHCKTFLLAILCDRLPANERCTFCCLEGTAIHVLRDCTRATAIWVQMVPPEVCDQFFSTSLHDWMHRFLQKPWFPNRDYYADCLRFTVTTWLLWKDRNSSIFKRNSPTDNDGLYSLIQSLVKEYLMLLHLKGEEGTSSANSLSQNSRLKLFIKLNVDGCCNDNPGNAGYGGLFRDVEGKWLGGFYGSLGLATNVKADLFAICQGLITAWDLGYRTVLVETDSLEAINLIKEANIEDCAYGDLLADIRSLMQRNWSLDLIHSLRQDNACADILSKLGAEQHEVYCFLAHPPQQLQLALVADALQVQIPCL* 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01761 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 436 IPR027417 -
Phac1g01761 1310 PRINTS Disease resistance protein signature 377 391 - -
Phac1g01761 1310 PRINTS Disease resistance protein signature 208 223 - -
Phac1g01761 1310 PRINTS Disease resistance protein signature 707 723 - -
Phac1g01761 1310 PRINTS Disease resistance protein signature 284 298 - -
Phac1g01761 1310 ProSiteProfiles TIR domain profile. 10 174 IPR000157 GO:0007165
Phac1g01761 1310 Pfam TIR domain 11 186 IPR000157 GO:0007165
Phac1g01761 1310 Gene3D Ribonuclease Inhibitor 567 805 IPR032675 -
Phac1g01761 1310 ProSiteProfiles RNase H type-1 domain profile. 1149 1279 IPR002156 GO:0003676|GO:0004523
Phac1g01761 1310 Pfam NB-ARC domain 194 415 IPR002182 GO:0043531
Phac1g01761 1310 Pfam Reverse transcriptase-like 1156 1275 IPR002156 GO:0003676|GO:0004523
Phac1g01761 1310 SUPERFAMILY L domain-like 527 772 - -
Phac1g01761 1310 Gene3D - 342 426 IPR042197 -
Phac1g01761 1310 Gene3D - 6 175 IPR035897 -
Phac1g01761 1310 CDD RNase_H_like 1155 1275 IPR044730 -
Phac1g01761 1310 FunFam Disease resistance protein (TIR-NBS-LRR class) 344 426 - -
Phac1g01761 1310 Gene3D - 1152 1280 IPR036397 GO:0003676
Phac1g01761 1310 SUPERFAMILY Ribonuclease H-like 1153 1281 IPR012337 -
Phac1g01761 1310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 764 IPR044974 GO:0006952
Phac1g01761 1310 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 152 IPR035897 -
Phac1g01761 1310 SUPERFAMILY "Winged helix" DNA-binding domain 413 517 IPR036390 -
Phac1g01761 1310 SMART LRR_typ_2 593 616 IPR003591 -
Phac1g01761 1310 SMART LRR_typ_2 709 732 IPR003591 -
Phac1g01761 1310 SMART till_3 11 149 IPR000157 GO:0007165
Phac1g01761 1310 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 176 - -
Phac1g01761 1310 Gene3D - 176 339 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01761 Phac-Chr1 26994480 27002313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01761 19 750 WRKY Transcription Factor Family AT4G12020 32.258 1.60e-79 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01761 - - var:108321227 1248.03