Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01738 ATGGTCGCATTGTTCTCTCCTCCTGTCTTCTCAGCCAAGGGGTGGCTCTTAGAGGAGGAGCCATTAGGCTATAATATTACCCAAAACCGCTTCTACCAAGATGATGTGTCATCGGAGTACTCCTTTCCCTATCAATTTTATCCATCGCAGCCGCAGATTGAGGTTGAATTACAAAGGTCCACTGCACCATCCCCTGATCCTGCCATGGTCAAGAAACTTAGCCACAATGCTAGTGAACGTGATCGCCGCAAGAAGGTCAACAACTTGGTTTCTTCACTTCGCTCTCTTCTTCCACTTGCAGATCAAACGAAAAAAATGAGCATTCCTTCAACAGTTTCTAGAGTGTTGAAATACATTCCTGAACTACAACAGCAAGTGCAAGCACTAACAAAGAGAAAAGAGGAGCTTCTATGCAGAATTTCTCGGCAATTGCAAGGAGATGCAGTGAAGAAAGAATCTCATAGGAAAATTTCCCATCACAACTCTTCTTTTGTTGTCTCAACAACTAGGCTTAACGATTGTGAAGCTGTAGTTCACATTTCCTCTCATGAGACCCACAAGGCTCCACTATCCGAGATCTTGCAGTGTTTAGAAAATGATGGCCTTTTTCTGCTAGATGCTTCTTCCTCACAAACCTTTGGAGGAAGGTTCTTCTACAATTTGCATTTTCAGGTGGCAAAAGCAGATAGATTAGAGTCTGATATTCTGACTGAGAAGCTTTTACCAATATATGAGAAGCAAAGGATTTTTCAATGA 756 0.4233 MVALFSPPVFSAKGWLLEEEPLGYNITQNRFYQDDVSSEYSFPYQFYPSQPQIEVELQRSTAPSPDPAMVKKLSHNASERDRRKKVNNLVSSLRSLLPLADQTKKMSIPSTVSRVLKYIPELQQQVQALTKRKEELLCRISRQLQGDAVKKESHRKISHHNSSFVVSTTRLNDCEAVVHISSHETHKAPLSEILQCLENDGLFLLDASSSQTFGGRFFYNLHFQVAKADRLESDILTEKLLPIYEKQRIFQ* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01738 251 Gene3D - 66 160 IPR036638 GO:0046983
Phac1g01738 251 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 230 - -
Phac1g01738 251 MobiDBLite consensus disorder prediction 60 83 - -
Phac1g01738 251 Coils Coil 119 139 - -
Phac1g01738 251 FunFam Transcription factor ORG2 66 151 - -
Phac1g01738 251 SMART finulus 76 128 IPR011598 GO:0046983
Phac1g01738 251 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 141 IPR036638 GO:0046983
Phac1g01738 251 CDD bHLH_AtORG2_like 71 144 - -
Phac1g01738 251 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
Phac1g01738 251 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01738 1 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.732 3.43e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac1g01738 HLH 1.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01738 - - gmx:100803424 396.356