Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01727 ATGGGGATGGCTGCAGAGTCGCAGTTTCATGTGTTGGCTGTTGATGACAGCATCATAGATAGGAAACTCATTGAGAGGCTCCTCAGAACCTCTTCCTACCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGCGTGAGAATGATAAGACCAACCCAAGTACACCATCTGTTTCTCCCAACAACAATCATCAGGAGGTGGAGGTGAATCTTGTTATTACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTTGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTAGCAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTGAGGCTGTCAGATTTGAACAAGCTTAAACCCCACATGAAGAAGACCAAGTTGAAAGATCAAAAGCAAGGAACAGCAGAAAAGATTGAAAACTCAGAAGTTCTACAGCAACATGCCCAGCAAATACTCCAAAATGACCAGAAACAAGCACCAAAACCCCAAGATCCTCGGCCAGAGTCAGAGTCACAGCCACAACCAACTATAGAACAACAGCAACCATCACTACAACAAGCCAACAATAACAAGAGGAAGACCATGGAACAGGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 726 0.438 MGMAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDKTNPSTPSVSPNNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKLKDQKQGTAEKIENSEVLQQHAQQILQNDQKQAPKPQDPRPESESQPQPTIEQQQPSLQQANNNKRKTMEQGLSPETDRTRPRYSGIATVV* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01727 241 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 200 IPR045279 GO:0009736
Phac1g01727 241 Gene3D - 10 229 - -
Phac1g01727 241 SMART REC_2 9 143 IPR001789 GO:0000160
Phac1g01727 241 MobiDBLite consensus disorder prediction 194 220 - -
Phac1g01727 241 MobiDBLite consensus disorder prediction 176 241 - -
Phac1g01727 241 Pfam Response regulator receiver domain 11 141 IPR001789 GO:0000160
Phac1g01727 241 SUPERFAMILY CheY-like 8 141 IPR011006 -
Phac1g01727 241 CDD REC_typeA_ARR 11 142 - -
Phac1g01727 241 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01727 Phac-Chr1 26393199 26395541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01727 1 241 Response Regulator Gene Family AT3G57040 62.651 8.86e-99 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac1g01727 Response_reg 1.5e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01727 K14492 - gmx:100814494 383.645