Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01701 ATGGTGGAGAAGGCTTCCATAGAGGATGTAATGAAAGTGCTGTTGGCTTCCAGAAAGCAAGACATGCAGCAACTATGGGCCACTTGTTCTCACTTAGTAGCCAAATCAGGTCTTCCTCCCGAGGTTCTAGCCAAGCACCTCCCTATAGACATTGTGGCTAAGATCGAAGAGCTACGTATCAAATCGTCTATGGCGCGCCGCTCCTTGGTGCCGCACCACCACCACCATCATCCCCACCATCACCACGCCGCCCTCGATCTTGAGGACCAGAAAATCCGGCGAATGAGGCGCGCCCTGGACTCCTCCGATGTCGAACTCGTAAAGCTCATGGTAATGGGAGAGGGTCTCAACCTCGACGAAGCGCTGGCCTTACCCTACGCGGTGGAGAACTGCAGCAGAGAGGTGGTGAAGGCATTGCTGGAACTCGGTGCAGCCGATGTCAACTACCCCTCCGGCCCCGCCGGAAAGACGCCGCTCCACATTGCGGCGGAGATGGTGTCGCCCGACATGGTGGCGGTGCTGCTGGACCACCACGCGGACCCGAATGTGAGAACCGTTGATGGGGTCACGCCTTTGGACATCCTCAGAACCCTAACCTCGGATTTCCTCTTTAAGGGTGCTGTCCCAGGATTGACCCACATCGAACCCAACAAACTAAGGCTGTGTTTGGAGCTTGTTCAATCCGCAGCTCTTGTCATGTCACGAGAAGAAGGCAATGCCAACAACAACAACGCTCCTTCTAACTCCGCAGCACCCATTTACCCTCCCCCCATGAACGAGGACCATAACAGCAGTAGTAGCAGCGGCAACAACAACAACATTGGAAATCTGAACTTGGATTCAAGGTTGGTGTATCTCAATCTTGGTGCGACAGCTTCCATGAGTTCCCGGTTGGACGGTGGGGAGGACGAGAGAGAAGCCATGAACACAACCATGTACCACCACCACTCTCATGACTTCTAG 963 0.5462 MVEKASIEDVMKVLLASRKQDMQQLWATCSHLVAKSGLPPEVLAKHLPIDIVAKIEELRIKSSMARRSLVPHHHHHHPHHHHAALDLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALPYAVENCSREVVKALLELGAADVNYPSGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVMSREEGNANNNNAPSNSAAPIYPPPMNEDHNSSSSSGNNNNIGNLNLDSRLVYLNLGATASMSSRLDGGEDEREAMNTTMYHHHSHDF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01701 320 Pfam Ankyrin repeats (3 copies) 102 184 IPR002110 GO:0005515
Phac1g01701 320 SMART ANK_2a 119 149 IPR002110 GO:0005515
Phac1g01701 320 SMART ANK_2a 154 183 IPR002110 GO:0005515
Phac1g01701 320 MobiDBLite consensus disorder prediction 238 274 - -
Phac1g01701 320 Pfam Domain of unknown function (DUF3420) 37 96 IPR024228 -
Phac1g01701 320 ProSiteProfiles Ankyrin repeat region circular profile. 154 184 - -
Phac1g01701 320 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 311 IPR044284 GO:0099402
Phac1g01701 320 MobiDBLite consensus disorder prediction 259 274 - -
Phac1g01701 320 ProSiteProfiles Ankyrin repeat profile. 154 186 IPR002110 GO:0005515
Phac1g01701 320 FunFam regulatory protein NPR5 isoform X2 85 202 - -
Phac1g01701 320 Gene3D - 81 202 IPR036770 -
Phac1g01701 320 SUPERFAMILY Ankyrin repeat 113 197 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01701 Phac-Chr1 26115268 26116230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01701 155 192 Ion Channels AT2G26650 52.632 6.85e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01701 K14508 - gmx:100816086 541.576