Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01700 ATGTCCCTTGAAGACTCTCTAAGATCTCTCTCCCTCGATTACCTCAACCTCCTTATCAACGGCCAGGCCTTCAGCGACGTCACTTTCAGCGTTGAGGGTCGCCTAGTCCACGCGCACCGCTGCATACTCGCCGCCCGCAGCCTCTTCTTCCGGAAATTCTTCTGCGGCCCGGACCCTCCCTCCGGTCTGGACCCCTCCGGTCCGCGGCTGAACTCGCGCTCCGGCGTCATCCCAGTCAACTCCGTCGGCTACGAGGTCTTCCTTCTCATGCTCCAGTTCCTGTACAGTGGGCAAGTCTCCATAGTCCCTCAGAAGCACGAGGCCCGCCCCAATTGCGGCGAACGAGGGTGCTGGCACACGCATTGCACCTCCGCCGTCGATCTCGCCCTTGACACCCTCGCCGCCGCCAGATACTTCGGCGTGGAACAGCTTGCATTGCTTACCCAGGACAGTTACTGCTGCGGGTCTGCTCTCGTTTTGGGAAGTGGGAACGGGGTCTGTGATGATATGATATGA 516 0.6008 MSLEDSLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPSGPRLNSRSGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEARPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQDSYCCGSALVLGSGNGVCDDMI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01700 171 SUPERFAMILY POZ domain 9 148 IPR011333 -
Phac1g01700 171 ProSiteProfiles BTB domain profile. 25 103 IPR000210 GO:0005515
Phac1g01700 171 Gene3D Potassium Channel Kv1.1; Chain A 3 152 IPR011333 -
Phac1g01700 171 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 150 IPR044284 GO:0099402
Phac1g01700 171 CDD BTB_POZ_NPR_plant 8 150 - -
Phac1g01700 171 SMART BTB_4 25 156 IPR000210 GO:0005515
Phac1g01700 171 Pfam BTB/POZ domain 16 105 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01700 Phac-Chr1 26113284 26114472 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phac1g01700 BTB 5.2e-16 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01700 K14508 - gmx:100783294 253.832