Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g01647 | ATGAGAAGCGGAATTGAGCTGTCGATTTCGTGTTCAAGTTTTGGATCTGCGAGGATGAAGTCTTGGTCAGTGGATGAGTGGAGGGAGTACTTTGTGTCTTCTAATTCGGATATATTCGAGATAATTGAGAACGCGATAATCGTGGCGGCTTCGGATTGTCCGAAGGAGTTTAGAGTGAGGAGGGATACGATTGCGGAGAGGCTGTTCTGTTCCAGCTTGACTCGCTGTGCGGGGTGTGACCGTGCGGAGTTGGCTGTGAGGGGAGTTGGTAAAGAGAGTGATGGCGGGGGTTGCAAGAATGCGGTAGAAAGAGATGGGGGTGAGTTCGCAGGAGCAAGCAAAGAGAGCAAGGTCAATGAAGGTGGTGATGAGGATGCAGAGATTGATGTGAACGGTGTTAGCAACTATAGTTTTGGTGAGGCCGAGGCATTAACTGATGAGATGGATGAAGAGACTCAGTATGTAGGGGAGATTTTGAGGATCAAAGGTGTTCTGCTTAACCGTGATGAAGAGTCTGAGTCTGTGTTATTTGAATCGTTGAGGAGGCTTCAACTGATGGAGCTCACCGTGGATTGTCTTAAGGCAACTGAGATTGGAAAGGCTGTCAATCCTCTCAGAAAACGCGGATCAAAGGATATTCGTCAACTTGCAAAGACTCTTATCGATGGCTGGAAACAAATGGTTGATGAATGGGTGAAGGCCACTGCTACTACAGCTATTGCAGCTTCAGATGAAGGCACACCGGATTCAGTTAATCCATCTGTTGTTGATGATGAAGAAGAAGAAGGACTTCCATCACCTCCTATGGATGAAGGGGCCTTCTTTGTTGCTCCAACTGGTTCCATAGAACTTTCGCAGTTCTTTGATGGCATGGACGATGATGGAAATCCTCGACCAAGTGGCCCATCCCACAAGAACCGTGACAGTAATAGCAGAAAGCCAGCCATCCCTAACAGGGAGGATAAGAGTCAACAAGCCAAGAGAAATGATGCTGATGTGCCCGTGAGGCCAAATAAGCCAGTAACCTCTGATTCTGGCCCTGGCAGACCCCTCCAATACAATATGCAAAGAAAAAGTAATGTGGAGCCAAAGGTTCAGCAAAAAGTAGAGAACAATTCAGTCACAAGGAGGCCTCCCATTGGTCATCTAGATAAATCCATGCATTCAGATGATGCGGCTGTCCAAGTAAAGCTAGAAGCCACCAAGAGGAGACTTCAGGAGAGTTATCAACAAGCTGAAAATGCCAAGAGGCAGAGAACAATACAAGTTATGGAAATAAATGATCTCCCGAAGCATGTTAACTACCGAAATCCACATTCCAAGCCTGGTTATCACAATAGGAACCGGGCTAATACTCGAAGGTAG | 1365 | 0.4674 | MRSGIELSISCSSFGSARMKSWSVDEWREYFVSSNSDIFEIIENAIIVAASDCPKEFRVRRDTIAERLFCSSLTRCAGCDRAELAVRGVGKESDGGGCKNAVERDGGEFAGASKESKVNEGGDEDAEIDVNGVSNYSFGEAEALTDEMDEETQYVGEILRIKGVLLNRDEESESVLFESLRRLQLMELTVDCLKATEIGKAVNPLRKRGSKDIRQLAKTLIDGWKQMVDEWVKATATTAIAASDEGTPDSVNPSVVDDEEEEGLPSPPMDEGAFFVAPTGSIELSQFFDGMDDDGNPRPSGPSHKNRDSNSRKPAIPNREDKSQQAKRNDADVPVRPNKPVTSDSGPGRPLQYNMQRKSNVEPKVQQKVENNSVTRRPPIGHLDKSMHSDDAAVQVKLEATKRRLQESYQQAENAKRQRTIQVMEINDLPKHVNYRNPHSKPGYHNRNRANTRR* | 455 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g01647 | 454 | Pfam | TFIIS helical bundle-like domain | 180 | 228 | IPR017923 | - | |
Phac1g01647 | 454 | MobiDBLite | consensus disorder prediction | 345 | 374 | - | - | |
Phac1g01647 | 454 | ProSiteProfiles | TFIIS N-terminal domain profile. | 156 | 231 | IPR017923 | - | |
Phac1g01647 | 454 | SMART | TFS2_5 | 155 | 230 | IPR003617 | GO:0005634 | |
Phac1g01647 | 454 | MobiDBLite | consensus disorder prediction | 109 | 129 | - | - | |
Phac1g01647 | 454 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 146 | 241 | IPR035441 | - | |
Phac1g01647 | 454 | PANTHER | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED | 21 | 441 | IPR044805 | - | |
Phac1g01647 | 454 | MobiDBLite | consensus disorder prediction | 240 | 274 | - | - | |
Phac1g01647 | 454 | MobiDBLite | consensus disorder prediction | 286 | 390 | - | - | |
Phac1g01647 | 454 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 154 | 235 | IPR035441 | - | |
Phac1g01647 | 454 | Coils | Coil | 395 | 422 | - | - | |
Phac1g01647 | 454 | MobiDBLite | consensus disorder prediction | 298 | 334 | - | - | |
Phac1g01647 | 454 | CDD | TFIIS_I | 157 | 229 | - | - | |
Phac1g01647 | 454 | MobiDBLite | consensus disorder prediction | 427 | 454 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g01647 | Phac-Chr1 | 24951564 | 24955250 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Phac1g01647 | Med26 | 1.7e-11 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g01647 | - | - | gmx:100799367 | 642.499 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phac1g01647 | 1 | 24951564 | 24955250 | Phac1g01647 | 1 | 24951564 | 24955250 | ECH |