Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01643 ATGGCATCAAGAACCACCGTTAAACAACAGGGCACAGACGAAGCAGTAGTGGAGGGAGGGAAACAGCAGAAGAAGAAGGGTGTAACGAATGGAAGGAACCGCAAGGCATTAGGTGATATTGGGAATTTGGCCAATGTAGGAGAAGTTGAAGTCAAGCCTAATCGCCCCATCACAAGGAGTTTTGGAGCTCTGCTACTTGCCAACGCACAAGCAGAAGCAGCAGCAGCTGCTGATAAGAATAAGAATAACAAGGTTTCTGCCAATGTGGCTGGACCTCCACCTGTTTCTAATGCAGTTGAAGTGACCAAAAGAGTGGTCCATAAACGGTGTCAGAAGAAAGTCACTGTAAAACCAAAACCTAAGAAAGCCATTGACAAGGAAGCTATCCCAAATAAGAAGATCCAGAAAGACAAGAAAAGGGAAGGAGATGACAACTCCAAGAAGAAAACACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCGTGCGGCATAACTGACAAACCGAAGGAGCAGATTATTGACATTGATGCTGGTGATGTCGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTTTTGAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCTGAGATAAAGGAGAGGTCGAGAGCTATATTAGTTAATTGGCTGATTGAAGTCAACACCAAATTTGACCTTTCACTTGAGACCCTTTACTTGACAATCAATATAATTGATCGGTTCCTATCAGTTAAGAGTATTCCAAGTTGTAGGGAACTGCAGTTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCTCAGGTTGAGGATTTTGTCTGCCTTACAACTTACACTCATGAACAGATACTGGTCATGGAGAAAACAATACTAGGTAATCTGGAATGGACTTTGACAGTCCCAACATCTCTTGTTTTTCTGATTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGTTGGAAAACATGGCTCATTTTCTGTCTGAGTTGGGATTGGTGCACTATACCACCGTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAATAAGACTCCCCTTTGGAATGAGAGACTTAAGCTGCACACGGGTTATTCAATAGAACAACTTATGGAATGTGCTAGATTATTGGTGAGTTTCCACTCCATGGTTGGGAATGAAGAGCTGAAGGTAGTGTACAGAAAGTATTCTGATCCTCAGAAAGGAGCTGTTGCTATGCTCCCACCAGCTAAAAATCTTCTGCCTGAAGGTTTTGTCTCTCGATAG 1350 0.4385 MASRTTVKQQGTDEAVVEGGKQQKKKGVTNGRNRKALGDIGNLANVGEVEVKPNRPITRSFGALLLANAQAEAAAAADKNKNNKVSANVAGPPPVSNAVEVTKRVVHKRCQKKVTVKPKPKKAIDKEAIPNKKIQKDKKREGDDNSKKKTHAFTSVLTARSKAACGITDKPKEQIIDIDAGDVDNELAAVEYIDDLYRFYKLFENENRPHDYIDSQPEIKERSRAILVNWLIEVNTKFDLSLETLYLTINIIDRFLSVKSIPSCRELQLVGISAMLMASKYEEIWPPQVEDFVCLTTYTHEQILVMEKTILGNLEWTLTVPTSLVFLIRFIKATVPDQELENMAHFLSELGLVHYTTVMYCPSMVAASAVFAARCTLNKTPLWNERLKLHTGYSIEQLMECARLLVSFHSMVGNEELKVVYRKYSDPQKGAVAMLPPAKNLLPEGFVSR* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01643 449 MobiDBLite consensus disorder prediction 1 37 - -
Phac1g01643 449 ProSitePatterns Cyclins signature. 224 255 IPR006671 -
Phac1g01643 449 SUPERFAMILY Cyclin-like 320 439 IPR036915 -
Phac1g01643 449 Gene3D - 209 319 - -
Phac1g01643 449 MobiDBLite consensus disorder prediction 118 149 - -
Phac1g01643 449 FunFam G2/mitotic-specific cyclin-1 307 433 - -
Phac1g01643 449 SUPERFAMILY Cyclin-like 184 318 IPR036915 -
Phac1g01643 449 Pfam Cyclin, N-terminal domain 198 318 IPR006671 -
Phac1g01643 449 PIRSF Cyclin_A_B_D_E 1 448 IPR046965 GO:0016538|GO:0044772
Phac1g01643 449 SMART cyclin_7 325 407 IPR013763 -
Phac1g01643 449 SMART cyclin_7 229 312 IPR013763 -
Phac1g01643 449 SMART Cyclin_C_2 321 438 IPR004367 -
Phac1g01643 449 PANTHER CYCLINS 141 429 IPR039361 -
Phac1g01643 449 Pfam Cyclin, C-terminal domain 321 437 IPR004367 -
Phac1g01643 449 CDD CYCLIN_AtCycB-like_rpt2 321 437 - -
Phac1g01643 449 MobiDBLite consensus disorder prediction 111 149 - -
Phac1g01643 449 Gene3D - 195 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01643 Phac-Chr1 24774595 24777435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01643 1 442 Core Cell Cycle Gene Families AT4G37490 48.707 1.53e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01643 K21777 - gmx:547919 622.083