Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01641 ATGGCATCAAGAACCACCGTTAAACAACAGGGCACAGACGAAGCAGTAGTGGAGGGAGGGAAACAGCAGAAGAAGAAGGGTGTAACGAATGGAAGGAACCGCAAGGCATTAGGTGATATTGGGAATTTGGCCAATGTAGGAGAAGTTGAAGTCAAGCCTAATCGCCCCATCACAAGGAGTTTTGGAGCTCTGCTACTTGCCAACGCACAAGCAGAAGCAGCAGCAGCTGCTGATAAGAATAAGAATAACAAGAAACAGGTTTCTGCCAATGTGGCTGGACCTCCACCTGTTTCTAATGCAGTTGAAGTGACCAAAAGAGTGGTCCATAAACGGTGTCAGAAGAAAGTCACTGTAAAACCAAAACCTAAGAAAGCCATTGACAAGGAAGCTATCCCAAATAAGAAGATCCAGAAAGACAAGAAAAGGGAAGGAGATGACAACTCCAAGAAGAAAACACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCGTGCGGCATAACTGACAAACCGAAGGAGCAGATTATTGACATTGATGCTGGTGATGTCGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTTTTGAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCTGAGATAAAGGAGAGGTCGAGAGCTATATTAGTTAATTGGCTGATTGAAGTCAACACCAAATTTGACCTTTCACTTGAGACCCTTTACTTGACAATCAATATAATTGATCGGTTCCTATCAGTTAAGAGTATTCCAAGTTGTAGGGAACTGCAGTTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCTCAGGTTGAGGATTTTGTCTGCCTTACAACTTACACTCATGAACAGATACTGGTCATGGAGAAAACAATACTAGGTAATCTGGAATGGACTTTGACAGTCCCAACATCTCTTGTTTTTCTGATTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGGGAATGTGCTAG 1035 0.4386 MASRTTVKQQGTDEAVVEGGKQQKKKGVTNGRNRKALGDIGNLANVGEVEVKPNRPITRSFGALLLANAQAEAAAAADKNKNNKKQVSANVAGPPPVSNAVEVTKRVVHKRCQKKVTVKPKPKKAIDKEAIPNKKIQKDKKREGDDNSKKKTHAFTSVLTARSKAACGITDKPKEQIIDIDAGDVDNELAAVEYIDDLYRFYKLFENENRPHDYIDSQPEIKERSRAILVNWLIEVNTKFDLSLETLYLTINIIDRFLSVKSIPSCRELQLVGISAMLMASKYEEIWPPQVEDFVCLTTYTHEQILVMEKTILGNLEWTLTVPTSLVFLIRFIKATVPDQEGMC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01641 344 MobiDBLite consensus disorder prediction 1 37 - -
Phac1g01641 344 Pfam Cyclin, N-terminal domain 200 320 IPR006671 -
Phac1g01641 344 Gene3D - 197 338 - -
Phac1g01641 344 SMART cyclin_7 231 314 IPR013763 -
Phac1g01641 344 PANTHER CYCLINS 141 333 IPR039361 -
Phac1g01641 344 FunFam G2/mitotic-specific cyclin 210 321 - -
Phac1g01641 344 SUPERFAMILY Cyclin-like 186 320 IPR036915 -
Phac1g01641 344 Gene3D - 211 321 - -
Phac1g01641 344 MobiDBLite consensus disorder prediction 120 151 - -
Phac1g01641 344 MobiDBLite consensus disorder prediction 114 151 - -
Phac1g01641 344 Coils Coil 66 86 - -
Phac1g01641 344 PIRSF Cyclin_A_B_D_E 1 343 IPR046965 GO:0016538|GO:0044772
Phac1g01641 344 ProSitePatterns Cyclins signature. 226 257 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01641 Phac-Chr1 24774595 24777435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01641 1 341 Core Cell Cycle Gene Families AT5G06150 53.161 3.53e-106 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01641 K21777 - gmx:547919 451.825