Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01640 ATGGCATCAAGAACCACCGTTAAACAACAGGGCACAGACGAAGCAGTAGTGGAGGGAGGGAAACAGCAGAAGAAGAAGGGTGTAACGAATGGAAGGAACCGCAAGGCATTAGGTGATATTGGGAATTTGGCCAATGTAGGAGAAGTTGAAGTCAAGCCTAATCGCCCCATCACAAGGAGTTTTGGAGCTCTGCTACTTGCCAACGCACAAGCAGAAGCAGCAGCAGCTGCTGATAAGAATAAGAATAACAAGAAACAGGTTTCTGCCAATGTGGCTGGACCTCCACCTGTTTCTAATGCAGTTGAAGTGACCAAAAGAGTGGTCCATAAACGGTGTCAGAAGAAAGTCACTGTAAAACCAAAACCTAAGAAAGCCATTGACAAGGAAGCTATCCCAAATAAGAAGATCCAGAAAGACAAGAAAAGGGAAGGAGATGACAACTCCAAGAAGAAAACACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCGTGCGGCATAACTGACAAACCGAAGGAGCAGATTATTGACATTGATGCTGGTGATGTCGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTTTTGAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCTGAGATAAAGGAGAGGTCGAGAGCTATATTAGTTAATTGGCTGATTGAAGTCAACACCAAATTTGACCTTTCACTTGAGACCCTTTACTTGACAATCAATATAATTGATCGGTTCCTATCAGTTAAGAGTATTCCAAGTTGTAGGGAACTGCAGTTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCTCAGGTTGAGGATTTTGTCTGCCTTACAACTTACACTCATGAACAGATACTGGTCATGGAGAAAACAATACTAGGTAATCTGGAATGGACTTTGACAGTCCCAACATCTCTTGTTTTTCTGATTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGTTGGAAAACATGGCTCATTTTCTGTCTGAGTTGGGATTGGTGCACTATACCACCGTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAATAAGACTCCCCTTTGGAATGAGAGACTTAAGCTGCACACGGGTTATTCAATAGAACAACTTATGGAATGTGCTAGATTATTGGTGAGTTTCCACTCCATGGTTGGGAATGAAGAGCTGAAGGTAGTGTACAGAAAGTATTCTGATCCTCAGAAAGGAGCTGTTGCTATGCTCCCACCAGCTAAAAATCTTCTGCCTGAAGGTTTTGTCTCTCGATAG 1356 0.4381 MASRTTVKQQGTDEAVVEGGKQQKKKGVTNGRNRKALGDIGNLANVGEVEVKPNRPITRSFGALLLANAQAEAAAAADKNKNNKKQVSANVAGPPPVSNAVEVTKRVVHKRCQKKVTVKPKPKKAIDKEAIPNKKIQKDKKREGDDNSKKKTHAFTSVLTARSKAACGITDKPKEQIIDIDAGDVDNELAAVEYIDDLYRFYKLFENENRPHDYIDSQPEIKERSRAILVNWLIEVNTKFDLSLETLYLTINIIDRFLSVKSIPSCRELQLVGISAMLMASKYEEIWPPQVEDFVCLTTYTHEQILVMEKTILGNLEWTLTVPTSLVFLIRFIKATVPDQELENMAHFLSELGLVHYTTVMYCPSMVAASAVFAARCTLNKTPLWNERLKLHTGYSIEQLMECARLLVSFHSMVGNEELKVVYRKYSDPQKGAVAMLPPAKNLLPEGFVSR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01640 451 MobiDBLite consensus disorder prediction 1 37 - -
Phac1g01640 451 SUPERFAMILY Cyclin-like 322 441 IPR036915 -
Phac1g01640 451 SMART cyclin_7 231 314 IPR013763 -
Phac1g01640 451 SMART cyclin_7 327 409 IPR013763 -
Phac1g01640 451 Gene3D - 197 436 - -
Phac1g01640 451 PIRSF Cyclin_A_B_D_E 1 450 IPR046965 GO:0016538|GO:0044772
Phac1g01640 451 SUPERFAMILY Cyclin-like 186 320 IPR036915 -
Phac1g01640 451 Pfam Cyclin, C-terminal domain 323 439 IPR004367 -
Phac1g01640 451 CDD CYCLIN_AtCycB-like_rpt2 323 439 - -
Phac1g01640 451 SMART Cyclin_C_2 323 440 IPR004367 -
Phac1g01640 451 FunFam G2/mitotic-specific cyclin-1 309 435 - -
Phac1g01640 451 MobiDBLite consensus disorder prediction 120 151 - -
Phac1g01640 451 Gene3D - 211 321 - -
Phac1g01640 451 PANTHER CYCLINS 142 431 IPR039361 -
Phac1g01640 451 Coils Coil 66 86 - -
Phac1g01640 451 MobiDBLite consensus disorder prediction 115 151 - -
Phac1g01640 451 ProSitePatterns Cyclins signature. 226 257 IPR006671 -
Phac1g01640 451 Pfam Cyclin, N-terminal domain 200 320 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01640 Phac-Chr1 24774595 24777435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01640 1 444 Core Cell Cycle Gene Families AT4G37490 49.032 1.60e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01640 K21777 - gmx:547919 630.943