Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01639 ATGCAAAGATATATAAGTTTTTTGAATGAGTGGGTTCTTTTGCAATTCATAGACGAAGCAGTAGTGGAGGGAGGGAAACAGCAGAAGAAGAAGGGTGTAACGAATGGAAGGAACCGCAAGGCATTAGGTGATATTGGGAATTTGGCCAATGTAGGAGAAGTTGAAGTCAAGCCTAATCGCCCCATCACAAGGAGTTTTGGAGCTCTGCTACTTGCCAACGCACAAGCAGAAGCAGCAGCAGCTGCTGATAAGAATAAGAATAACAAGAAACAGGTTTCTGCCAATGTGGCTGGACCTCCACCTGTTTCTAATGCAGTTGAAGTGACCAAAAGAGTGGTCCATAAACGGTGTCAGAAGAAAGTCACTGTAAAACCAAAACCTAAGAAAGCCATTGACAAGGAAGCTATCCCAAATAAGAAGATCCAGAAAGACAAGAAAAGGGAAGGAGATGACAACTCCAAGAAGAAAACACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCGTGCGGCATAACTGACAAACCGAAGGAGCAGATTATTGACATTGATGCTGGTGATGTCGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTTTTGAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCTGAGATAAAGGAGAGGTCGAGAGCTATATTAGTTAATTGGCTGATTGAAGTCAACACCAAATTTGACCTTTCACTTGAGACCCTTTACTTGACAATCAATATAATTGATCGGTTCCTATCAGTTAAGAGTATTCCAAGTTGTAGGGAACTGCAGTTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCTCAGGTTGAGGATTTTGTCTGCCTTACAACTTACACTCATGAACAGATACTGGTCATGGAGAAAACAATACTAGGTAATCTGGAATGGACTTTGACAGTCCCAACATCTCTTGTTTTTCTGATTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGTTGGAAAACATGGCTCATTTTCTGTCTGAGTTGGGATTGGTGCACTATACCACCGTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAATAAGACTCCCCTTTGGAATGAGAGACTTAAGCTGCACACGGGTTATTCAATAGAACAACTTATGGAATGTGCTAGATTATTGGTGAGTTTCCACTCCATGGTTGGGAATGAAGAGCTGAAGGTAGTGTACAGAAAGTATTCTGATCCTCAGAAAGGAGCTGTTGCTATGCTCCCACCAGCTAAAAATCTTCTGCCTGAAGGTTTTGTCTCTCGATAG 1371 0.4311 MQRYISFLNEWVLLQFIDEAVVEGGKQQKKKGVTNGRNRKALGDIGNLANVGEVEVKPNRPITRSFGALLLANAQAEAAAAADKNKNNKKQVSANVAGPPPVSNAVEVTKRVVHKRCQKKVTVKPKPKKAIDKEAIPNKKIQKDKKREGDDNSKKKTHAFTSVLTARSKAACGITDKPKEQIIDIDAGDVDNELAAVEYIDDLYRFYKLFENENRPHDYIDSQPEIKERSRAILVNWLIEVNTKFDLSLETLYLTINIIDRFLSVKSIPSCRELQLVGISAMLMASKYEEIWPPQVEDFVCLTTYTHEQILVMEKTILGNLEWTLTVPTSLVFLIRFIKATVPDQELENMAHFLSELGLVHYTTVMYCPSMVAASAVFAARCTLNKTPLWNERLKLHTGYSIEQLMECARLLVSFHSMVGNEELKVVYRKYSDPQKGAVAMLPPAKNLLPEGFVSR* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01639 456 SMART Cyclin_C_2 328 445 IPR004367 -
Phac1g01639 456 Gene3D - 216 326 - -
Phac1g01639 456 Pfam Cyclin, C-terminal domain 328 444 IPR004367 -
Phac1g01639 456 SUPERFAMILY Cyclin-like 191 325 IPR036915 -
Phac1g01639 456 SMART cyclin_7 332 414 IPR013763 -
Phac1g01639 456 SMART cyclin_7 236 319 IPR013763 -
Phac1g01639 456 MobiDBLite consensus disorder prediction 125 156 - -
Phac1g01639 456 ProSitePatterns Cyclins signature. 231 262 IPR006671 -
Phac1g01639 456 MobiDBLite consensus disorder prediction 119 156 - -
Phac1g01639 456 Coils Coil 71 91 - -
Phac1g01639 456 Pfam Cyclin, N-terminal domain 205 325 IPR006671 -
Phac1g01639 456 SUPERFAMILY Cyclin-like 327 446 IPR036915 -
Phac1g01639 456 PANTHER CYCLINS 147 436 IPR039361 -
Phac1g01639 456 CDD CYCLIN_AtCycB-like_rpt2 328 444 - -
Phac1g01639 456 FunFam G2/mitotic-specific cyclin-1 315 440 - -
Phac1g01639 456 PIRSF Cyclin_A_B_D_E 14 455 IPR046965 GO:0016538|GO:0044772
Phac1g01639 456 Gene3D - 202 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01639 Phac-Chr1 24774595 24777023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01639 15 449 Core Cell Cycle Gene Families AT4G37490 48.684 3.79e-128 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01639 K21777 - gmx:547919 624.009