Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01637 ATGGCATCAAGAACCACCGTTAAACAACAGGGCACAGACGAAGCAGTAGTGGAGGGAGGGAAACAGCAGAAGAAGAAGGGTGTAACGAATGGAAGGAACCGCAAGGCATTAGGTGATATTGGGAATTTGGCCAATGTAGGAGAAGTTGAAGTCAAGCCTAATCGCCCCATCACAAGGAGTTTTGGAGCTCTGCTACTTGCCAACGCACAAGCAGAAGCAGCAGCAGCTGCTGATAAGAATAAGAATAACAAGGTTTCTGCCAATGTGGCTGGACCTCCACCTGTTTCTAATGCAGTTGAAGTGACCAAAAGAGTGGTCCATAAACGGTGTCAGAAGAAAGTCACTGTAAAACCAAAACCTAAGAAAGCCATTGACAAGGAAGCTATCCCAAATAAGAAGATCCAGAAAGACAAGAAAAGGGAAGGAGATGACAACTCCAAGAAGAAAACACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCGTGCGGCATAACTGACAAACCGAAGGAGCAGATTATTGACATTGATGCTGGTGATGTCGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTTTTGAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCTGAGATAAAGGAGAGGTCGAGAGCTATATTAGTTAATTGGCTGATTGAAGTCAACACCAAATTTGACCTTTCACTTGAGACCCTTTACTTGACAATCAATATAATTGATCGGTTCCTATCAGTTAAGAGTATTCCAAGTTGTAGGGAACTGCAGTTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCTCAGGTTGAGGATTTTGTCTGCCTTACAACTTACACTCATGAACAGATACTGGTCATGGAGAAAACAATACTAGGTAATCTGGAATGGACTTTGACAGTCCCAACATCTCTTGTTTTTCTGATTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGTTGGAAAACATGGCTCATTTTCTGTCTGAGTTGGGATTGGTGCACTATACCACCGTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAATAAGACTCCCCTTTGGAATGAGAGACTTAAGCTGCACACGGGTTATTCAATAGAACAACTTATCTTTGTTGGTTGCAAACAGGGAATGTGCTAG 1227 0.4385 MASRTTVKQQGTDEAVVEGGKQQKKKGVTNGRNRKALGDIGNLANVGEVEVKPNRPITRSFGALLLANAQAEAAAAADKNKNNKVSANVAGPPPVSNAVEVTKRVVHKRCQKKVTVKPKPKKAIDKEAIPNKKIQKDKKREGDDNSKKKTHAFTSVLTARSKAACGITDKPKEQIIDIDAGDVDNELAAVEYIDDLYRFYKLFENENRPHDYIDSQPEIKERSRAILVNWLIEVNTKFDLSLETLYLTINIIDRFLSVKSIPSCRELQLVGISAMLMASKYEEIWPPQVEDFVCLTTYTHEQILVMEKTILGNLEWTLTVPTSLVFLIRFIKATVPDQELENMAHFLSELGLVHYTTVMYCPSMVAASAVFAARCTLNKTPLWNERLKLHTGYSIEQLIFVGCKQGMC* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01637 408 MobiDBLite consensus disorder prediction 1 37 - -
Phac1g01637 408 ProSitePatterns Cyclins signature. 224 255 IPR006671 -
Phac1g01637 408 MobiDBLite consensus disorder prediction 118 149 - -
Phac1g01637 408 Pfam Cyclin, N-terminal domain 198 318 IPR006671 -
Phac1g01637 408 SMART cyclin_7 229 312 IPR013763 -
Phac1g01637 408 SMART cyclin_7 325 407 IPR013763 -
Phac1g01637 408 FunFam G2/mitotic-specific cyclin 208 319 - -
Phac1g01637 408 PANTHER CYCLINS 140 384 IPR039361 -
Phac1g01637 408 Gene3D - 195 398 - -
Phac1g01637 408 PIRSF Cyclin_A_B_D_E 1 407 IPR046965 GO:0016538|GO:0044772
Phac1g01637 408 Pfam Cyclin, C-terminal domain 321 398 IPR004367 -
Phac1g01637 408 Gene3D - 209 319 - -
Phac1g01637 408 SUPERFAMILY Cyclin-like 320 399 IPR036915 -
Phac1g01637 408 SUPERFAMILY Cyclin-like 184 318 IPR036915 -
Phac1g01637 408 SMART Cyclin_C_2 321 408 IPR004367 -
Phac1g01637 408 MobiDBLite consensus disorder prediction 111 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01637 Phac-Chr1 24774595 24777435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01637 31 401 Core Cell Cycle Gene Families AT3G11520 54.545 6.57e-128 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01637 K21777 - gmx:547919 547.74