Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01632 ATGCCTTCGAGCTCGAATTCGAAGCAGAAAAAGAAGCAATCGAAGGCGCAGCTGCAAAACTCACCATTGTCGTCGAATACCACCATAACGCCTTCTAGAACGCAGCCACAACAACCACAAGAGCATGCCTCTTTGTGCGTAGAAGCTTCTCGAAAGTTCCCTTCTCTCATCGCTGAATCCGCGTTCGTCGCCGAAATCATCCATGTCGACGACACCGTTCCCCTTTTCAAGGGCTTCAGAATTTGGCTATCCGAACCTTCCATGCTCTCCTCCTCTCTCTCCCCCGGTTCCATTGTCTCGGTGTCTGTTCCATCTTCAGACGAGAAAAATTCACAATTACATAGTTTTCCCCTAGTGTCATTAGCTAATGAATGTGCCAAATGCAATGGACTGGAAATTGGGAAGGCAGTTGATGATTATGTTGCGGGGAACTACTTTGTGCTTGCAACGGTGTTTCCTGCTAGTAAGGTTTTGAAGAATGGCGTACGACTGTCTTCCAACCTTTATTATACCATGGGATGTCCTCCTATGGGAACAAGTGTGTTTGTTTGTGCATTACAGAAACAACTCTTGCCTACTCCTGCCAGTGAGAGCAATCAACAGCATTATATGGAAAATAATCGTCTACCTATTAATAATTGCAAGAAATTGTATCTTCAGTTGGTTCCTTCTAAAAAGGGGCTACCGTTGAAGTTTAATAGTTTTCCCTCATTGGACGTGTCTAAGGTGAAATCTCATGTCCAATTTGAGAATGACACTGTTGGTTCTCCTGCAACACCTTCTTATGGATCAAAGTTTTCTAATGCTAGTGGTCTGTCTTCTCCACAATTTGACGATTCAGCATCTAGTGTGCCAAATCATAAGAGTCAATCTCTGATTTCATCTGATGTCAGCTTAGCATTAAGGGATGAAAATTCTAAACAATTGCTTGAGACATGGGCAACTTCATGGTTATATTCTCGATCTTTACTTCTAGGAAATCTTGTCAGTGTTCCAATGTTTTCAGAGTGCTTTTTCCAAGTGATAGGAGCTAAAAAGCAGTCAGTTACCAAATCTGATCATTATCCATCAAATGGAAGCAGTGATTTATATCCTGAGGATTCTGATATAGCAGATAGTGTAAATCAGGCTTTCACTGTTAATTACGAAACAAAGGTATTTTTATCTCTGCCATCAAATACAGCATCTGAAGAGCCAATTCAAAGGGACATACATTGTGTGAAACTAGATCACAAAGTTGGTAATGCTAGCTTACCAGATAGAATCTCTAAATTGGGTGGTCTATCCAAAGAATATACACTTCTAAAGGACATAATTTCTTCGTCACTGAATGATGCTTTATCAAGTTTTGGTCTAAGAACTACAAGAGGTGTCCTTCTTCATGGTCCAACTGGTACAGGAAAGACTTCCCTGGCTCAACTATGTACTCATGACGTGGGAGTCAAATTTTTCCCAATAAATGGACCTGAAATTGTTACCCAATATTATGGGGAAAGTGAGCAAGCATTGCATAAAGTTTTTGATTCAGCCATTGAAGCTGCACCTGCTGTGGTATTCATTGATGAATTAGATGCAATTGCCCCTGCAAGGAAAGAAGGAGGTGAAGAGCTATCTCAAAGATTGGTTGCAACTTTATTGAATATGATGGATGGAATTAGTAGAACTGAAGGGTTACTTGTAATCGCTGCCACTAACCGCCCTGACCATATTGAGCCAGCTCTCAGACGACCTGGACGATTTGACAAGGAAATTGAAATTGGTGTTCCATCCCCCAAACAACGTTCAGATATTTTGCTCACTCTTCTCAATGAAATGGATCATTGTCTCTCTGAGGTACAAATTCAACACCTTGCCACAGTTACTCATGGTTTTGTGGGTGCTGATCTAGCTGCACTTTGCAATGAGGCAGCCTTGAATTGTCTGCGACATTATGCCAGCTTTAAGAAGACTTATGATTCTTGTTCTAATTATATAACCGATAAACCTGTTCTGGTGAATGGTGTAACAAACTCAATAGATCATTTGGATGAGGCAACTTCATCCATTTCAGATTTGTCGGCCACCAGTCCTGTATTACGTCCTTGCAGGATAAGAACAACTTATGAAACTACAGAAATAATTCCTGAGAGTGTTGAAGAAGAGCAGATTTTGAAAGTAAGCTTTGAAGATTTTCAGAAGGCCAGGATGAAAATAAGACCTAGTGCCATGAGAGAGGTAATCCTTGAGGTTCCAAAGGTTAATTGGGAAGATGTTGGCGGTCAAAAGGAGGTCAAAGCTCAATTGATGGAAGCAGTTGAATGGCCACAGAAACACCATGATGCATTTGACCGTATTGGAACTCGCCCTCCTACCGGTGTATTGATGTTTGGGCCTCCAGGTTGTAGTAAGACCCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGGTTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGTGAATCTGAGAAGGCCGTCAGATCATTATTTGCAAAAGCAAGGGCCAATGCCCCATCAATAGTATTTTTTGATGAAATAGACAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGGGTCATGAGTCAACTTCTTGTTGAGATGGATGGTTAG 2646 0.4172 MPSSSNSKQKKKQSKAQLQNSPLSSNTTITPSRTQPQQPQEHASLCVEASRKFPSLIAESAFVAEIIHVDDTVPLFKGFRIWLSEPSMLSSSLSPGSIVSVSVPSSDEKNSQLHSFPLVSLANECAKCNGLEIGKAVDDYVAGNYFVLATVFPASKVLKNGVRLSSNLYYTMGCPPMGTSVFVCALQKQLLPTPASESNQQHYMENNRLPINNCKKLYLQLVPSKKGLPLKFNSFPSLDVSKVKSHVQFENDTVGSPATPSYGSKFSNASGLSSPQFDDSASSVPNHKSQSLISSDVSLALRDENSKQLLETWATSWLYSRSLLLGNLVSVPMFSECFFQVIGAKKQSVTKSDHYPSNGSSDLYPEDSDIADSVNQAFTVNYETKVFLSLPSNTASEEPIQRDIHCVKLDHKVGNASLPDRISKLGGLSKEYTLLKDIISSSLNDALSSFGLRTTRGVLLHGPTGTGKTSLAQLCTHDVGVKFFPINGPEIVTQYYGESEQALHKVFDSAIEAAPAVVFIDELDAIAPARKEGGEELSQRLVATLLNMMDGISRTEGLLVIAATNRPDHIEPALRRPGRFDKEIEIGVPSPKQRSDILLTLLNEMDHCLSEVQIQHLATVTHGFVGADLAALCNEAALNCLRHYASFKKTYDSCSNYITDKPVLVNGVTNSIDHLDEATSSISDLSATSPVLRPCRIRTTYETTEIIPESVEEEQILKVSFEDFQKARMKIRPSAMREVILEVPKVNWEDVGGQKEVKAQLMEAVEWPQKHHDAFDRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVEMDG* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01632 881 FunFam Putative vesicular transport protein (CDC48) 409 587 - -
Phac1g01632 881 FunFam Calmodulin-interacting protein 111 589 746 - -
Phac1g01632 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 744 881 IPR027417 -
Phac1g01632 881 SMART AAA_5 454 590 IPR003593 GO:0016887
Phac1g01632 881 SMART AAA_5 782 878 IPR003593 GO:0016887
Phac1g01632 881 Pfam AAA+ lid domain 612 643 IPR041569 -
Phac1g01632 881 FunFam calmodulin-interacting protein 111 isoform X1 743 881 - -
Phac1g01632 881 Pfam ATPase family associated with various cellular activities (AAA) 458 587 IPR003959 GO:0005524|GO:0016887
Phac1g01632 881 Pfam ATPase family associated with various cellular activities (AAA) 786 881 IPR003959 GO:0005524|GO:0016887
Phac1g01632 881 Gene3D - 406 587 IPR027417 -
Phac1g01632 881 MobiDBLite consensus disorder prediction 1 43 - -
Phac1g01632 881 Gene3D - 747 881 IPR027417 -
Phac1g01632 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 659 IPR027417 -
Phac1g01632 881 PANTHER AAA-FAMILY ATPASE 73 881 - -
Phac1g01632 881 Gene3D - 589 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01632 Phac-Chr1 24739228 24748517 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01632 7 881 Calmodulin-binding Proteins AT3G56690 51.720 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01632 - - vum:124834498 1485.32