Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01631 ATGAAGGAAGAGGATTCCAATTGGTTTTCGCGATGGGAAGAGGAACTCCCACCGCCAGAGGATCTCATGCCCCTATCGCAAACCCTAATCACGCCCGATCTAGCCATGGCCTTCGACATCAGAAACCCCCACACCACCAACCTCAACACCGCGCAACAGCTTCAACACCAACAACAACAACCACCGCAACAACAACAGCAACAACCTTCCAACCCTTCCTCGCTCCCCAACCCCCAACAACCCACCTCCGCCGAGTTCGCCGACTCCGGCGAGCTCGGCTCCGGCACTGCCGGCGAGGAGCCCGCTCGAACCCTCAAGCGCCCGCGTCTTGTGTGGACCCCACAACTCCATAAGCGCTTCGTCGATGCCGTCGCGCACCTCGGCATAAAAAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGATGGTTTGACCAGAGAAAACGTTGCCAGCCACTTGCAGAAGTACCGTCTCTATCTCAAACGCATGCAGGGGATATCTGCCGCCGGACCCGGTGGTCCCGGAGGCGGCGCCTCCGGCGCCGTTGCCGACCCTGCCACTGACCACCTCTTCGCTAGCTCCCCGGTGCCGGCGCATTTCCTGCACCCCGCGACGCGGCCAAATTCGGATCACTTCCTTCCGTTTGTGCCGGTGCCGGCGCTCCACCACCACCAGCAGCAACAGCAGCAGCTGGCCGCGGCGGCGCAGTACCATAGGCAGGTGGGGCATTTTGGGTCGCCGCCGAACGGGCACTTCGAGAACCCGTTCATGTCTAGGCCGAATCTTCAGAGGATGGGTGGGGGTGGGGGTGGTCCTGTGCATAACCACCACTCTGTGAGTGGCTATGTGGAGGATATGGAATCTGCTAATGCTGCATCTGGAGGTAGAAAGGTTCTTACCCTGTTTCCAACTGGAGATGATTGA 930 0.5978 MKEEDSNWFSRWEEELPPPEDLMPLSQTLITPDLAMAFDIRNPHTTNLNTAQQLQHQQQQPPQQQQQQPSNPSSLPNPQQPTSAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISAAGPGGPGGGASGAVADPATDHLFASSPVPAHFLHPATRPNSDHFLPFVPVPALHHHQQQQQQLAAAAQYHRQVGHFGSPPNGHFENPFMSRPNLQRMGGGGGGPVHNHHSVSGYVEDMESANAASGGRKVLTLFPTGDD* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01631 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 163 IPR017930 -
Phac1g01631 309 MobiDBLite consensus disorder prediction 40 106 - -
Phac1g01631 309 FunFam Two-component response regulator 103 166 - -
Phac1g01631 309 Gene3D - 104 166 - -
Phac1g01631 309 MobiDBLite consensus disorder prediction 1 27 - -
Phac1g01631 309 MobiDBLite consensus disorder prediction 42 89 - -
Phac1g01631 309 MobiDBLite consensus disorder prediction 1 18 - -
Phac1g01631 309 Pfam Myb-like DNA-binding domain 111 159 IPR001005 -
Phac1g01631 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 108 160 IPR006447 GO:0003677
Phac1g01631 309 SUPERFAMILY Homeodomain-like 104 164 IPR009057 -
Phac1g01631 309 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 268 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01631 Phac-Chr1 24734247 24737702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01631 1 309 G2-like Transcription Factor Family AT3G10760 57.880 1.85e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g01631 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01631 - - gmx:100815363 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01631 1 24734247 24737702 Phac1g01631 1 24734247 24737702 ECH