Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01617 ATGGAAGGAGATGGTTATTGTGGGAGTTTCTTTCAGAGGTGCAAGCCTTACATAGCTATGATTTCTCTGCAATTCGGGTTTGCGGGTATGAACATAATCACTAAGGTTTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTGTATAGACATGCCTTTGCTACTGCGGCTATTGCCCCTTTTGCTCTTGTTCTTGAGAGGAAAGTGAGGCCCAAGATTACATTTCTTATGTTCATGCAAATATTCGTGTTGGGTCTACTTGGGCCTGTGATTGATCAGAACCTATACTATGCGGGGTTGAAATTTACTTCCCCTACCTACTCATGTGCAATAAGCAACATGCTCCCTGCAATGACATTTGTGATGGCTGCTATTTTCAGGATGGAAAAGGTGGACATAAGAAAATTTAGATGCCAAGCAAAAGTTTTAGGAACTATAGTAACAGTTGCTGGGGCCATGTTGATGACATTGTACAAAGGGCAAGTCATCAGTTTCTTGGGTTCTAAGTACATGCATCACCCCAGAAATTATGTTCCTGAAAACACCACTGATTCTGGTGAAAAGGACTGGTTCAAGGGCTCTATTCTTCTCATAATTGCCACCCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAGTGACACTAAGGAAATACCCTGCTCAGCTCTCTCTCACAGCCCTTGTGTGTGCCTTAGGTACACTGCAGTCAATTGCAGTTACCTTTGTCATGGAGCACAAGACATCTGTTTGGACCATTGGCTGGGATATGAACCTTCTTGCAGCAGCCTATGCTGGAATAATATCATCAGGAATCACCTACTATGTTCAAGGGATTGTCATGCAAAAGAAAGGGCCTGTTTTTGTAACTGCTTTCAGCCCTTTGATGATGATTATCGTAGCCATCATGGGTGCTTTCATCCTCGCAGAAAAAATATACCTTGGAGGGGTCGCAGGAGCTGTTCTCATAGTAATGGGACTTTACTCGGTTCTGTGGGGAAAATACAAGGAGAACAAGGAGAAAGAAGAGAAGATAACCATTGAGGTGATGAAGTGTTGTTCAGAAAATGGGAGATTGGAGACTGTGGTGGAAGATGGTGAAACAAACAATGATATTGAGATGCAAAAGGGTGAAGAAGCGTCCAGAGAGTTAAGGGTAGCCATTGTTGTTCCAAAAGTTTAA 1182 0.434 MEGDGYCGSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAAIFRMEKVDIRKFRCQAKVLGTIVTVAGAMLMTLYKGQVISFLGSKYMHHPRNYVPENTTDSGEKDWFKGSILLIIATLAWASFFILQAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKTSVWTIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMGAFILAEKIYLGGVAGAVLIVMGLYSVLWGKYKENKEKEEKITIEVMKCCSENGRLETVVEDGETNNDIEMQKGEEASRELRVAIVVPKV* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01617 393 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Phac1g01617 393 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020
Phac1g01617 393 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0016020|GO:0022857
Phac1g01617 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 336 - -
Phac1g01617 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01617 Phac-Chr1 24226078 24228591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01617 1 380 Nodulin-like Gene Family AT5G07050 63.117 1.71e-173 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01617 - - pvu:PHAVU_001G118300g 738.799