Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01573 ATGAACATGAATATGTGCCAAAATGTATCAGTTTCCTCTGAATGCCACCAAGAGCAGGTCTTTGCCCCTTCTTGCTCAAGCAGCCTTGATGACCTCTTCTCTGCTCAGAACACGGAAGTGGATGTTGAGTTGGAGTGGCTTTCAGAGTTTGTTGAAGACTGCTTTTCAAGTCCCCCAAGCTTTGTATTGGGAGCTGCGGGGGTTAAGACTACAAGCACAAGCACAAGCACCAACCCTTCTTCAGGCACATTGAAGAGAGCCCAACAAAATGAGTCTCCTTTGCAAAATTTTGCTGTGCCTGGGAAGGCCAGGAGCAAAAGGAAAAGGCTTTCAGCCCCTAGAACCAAGGACCCTTTAAGCATATGGTCACACCATCTGAACCCCCAAAATGAAGCCTTGAGTTCTGACCCTCCTCTGCTGAAACAGGCTTATTGGTTGGCTGACAGTGAACTCATTATGCCTAAGCCAAAGGAGGAGCAAGAAGTGAGCAAAGTGGATGGGGAAGTGGTGGAGAAGGGGGTAGTGATTATTAGCAAGGAAAGCTTTGGGGACTCTGAGCTTGAAGGTAGCAACGGTCAACAACCAATGCCAAGGAGGTGCACCCATTGCTTGGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTAGGTCCAAAGACACTTTGCAATGCATGTGGAGTTAGGTACAAGTCTGGTAGGTTGCTACCAGAGTATAGGCCAGCCAAGAGTCCCACTTTTGTAAGCTACTTGCACTCCAATTCCCACAAGAAAGTCATGGAGATGAGGATGTCTGTTTACTCTTCCATTTCTAGTGAGCAGTAG 822 0.483 MNMNMCQNVSVSSECHQEQVFAPSCSSSLDDLFSAQNTEVDVELEWLSEFVEDCFSSPPSFVLGAAGVKTTSTSTSTNPSSGTLKRAQQNESPLQNFAVPGKARSKRKRLSAPRTKDPLSIWSHHLNPQNEALSSDPPLLKQAYWLADSELIMPKPKEEQEVSKVDGEVVEKGVVIISKESFGDSELEGSNGQQPMPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSVYSSISSEQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01573 273 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 195 258 - -
Phac1g01573 273 SMART GATA_3 194 248 IPR000679 GO:0006355|GO:0043565
Phac1g01573 273 FunFam GATA transcription factor 190 273 - -
Phac1g01573 273 ProSitePatterns GATA-type zinc finger domain. 200 225 IPR000679 GO:0006355|GO:0043565
Phac1g01573 273 ProSiteProfiles GATA-type zinc finger domain profile. 194 230 IPR000679 GO:0006355|GO:0043565
Phac1g01573 273 PANTHER GATA TRANSCRIPTION FACTOR 25 265 - -
Phac1g01573 273 MobiDBLite consensus disorder prediction 70 96 - -
Phac1g01573 273 CDD ZnF_GATA 199 246 IPR000679 GO:0006355|GO:0043565
Phac1g01573 273 MobiDBLite consensus disorder prediction 70 122 - -
Phac1g01573 273 Gene3D - 190 262 IPR013088 GO:0006355|GO:0008270
Phac1g01573 273 Pfam GATA zinc finger 200 234 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01573 Phac-Chr1 20586060 20587917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01573 42 262 C2C2-Gata Transcription Factor Family AT4G32890 41.379 7.45e-43 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac1g01573 GATA 1.2e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01573 - - gmx:100786479 452.981