Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01542 ATGGTGAGCATTCAATCTCGATACACTGTGTTTCCCTCAGAAAGCACCCCCAACGAAAAACTCTATTCTTTGTGCGAGCAAATCAAGCTTCGCACTCATGCGCCACTCCTTTACGTGTTCAAGCCACACCCTCATCACGATGCATCAAGTTTTGTAAACACTCTGAGGCACTCTCTTAGCCAAGCCTTGACAATCTATTACCCAGTTGCGGGTAGGTTGAGTTGGATCCAAGGGGGGCGATGGGAGCTCCATTGCAATGCCAAGGGTGCACAACTCTTGGAAGCCATTTGCAAAGATGTGAATTTGGATGATTTGGGTGATTTTGTGCCTACCCATTTGGTGTCACAGCTCATACCAAGCATCGATTATGATGTTCCCATTGAGGACACGCCCTTGTTGGTTGCGCAGCTTACGAGGTTCCCTTGTGGTGGCGTTACCATTGGGGTGGCTTTGTGTAGAGGGAGCATCGACGGAATCGCCACCATGCGGTTCATGAACACGTGGGCCAAGTTGGCTCGGAGGGAGAACGTGGAAATGACACCATGCCATGATCGAAATGTTTTGAACTCGTACAAGACTCATTCGGGGTTGCACGATCATTCGGAGTTTCACCCTCCTCCTCCTTGGTTAGGTCCCTTGGGGAAAGACACCAAGGTGGTGGTTGCAATAGTGAAGCTCACGCGTGAACAAGTGAAGAAGCTCAAGCACAAGGGGAATCACGATAGCACGAACACTACTAGTCCTGGTCCTGGTTCACAACCTTATTCAACTTTTGAGGTTATTTCAGGGCACTTGTGGAGGTGTGTGAGTAAAGCTCGTTATGCAGGGAAAAGGGAGCAACCTACAAGGTTGAGCACTTTGGTTAATTGTAGGGGCCGAATGAGGCCACCTCTTCCTGAAAATTATGCAGGGAATACAGCATTTCCCACAGTGACACCAACATGTTCTTTTGGTGAAATCATGCATAGGCCTTTGAGTTATGCTGTTGGGAACGTTAGGGTGGCACTTGAAAGAGTGACGGGGGAGTTTGTGGAGTCTGCACTTGACCACATAGCAAGGGAGAAAGACATGAATTTGGTTAGGTACAATTTTCATTACCCTGCCCCAACTGTGCATAAGGGCCCATACAAGGGGAACCCGAATCTTTTTGTTGTGAGTTGGATGAATTTCTCGTTCAAGGATGCGGATTTTGGATGGGGAGAACCCTTGTATTTTGGCCCCGGGTACATGGATTCTGAAGGAAAAGCATTTCTTATGAATGAGGCTAAGGGTGATGGCATCATCGTGGCCATTTCCTTGGAAGCATCTCACATGGATGCTTTCAAGAAATATTTCTATGGTGATATCGAGGAGGGATCTCTCATTTCCAAACTGTGA 1377 0.4779 MVSIQSRYTVFPSESTPNEKLYSLCEQIKLRTHAPLLYVFKPHPHHDASSFVNTLRHSLSQALTIYYPVAGRLSWIQGGRWELHCNAKGAQLLEAICKDVNLDDLGDFVPTHLVSQLIPSIDYDVPIEDTPLLVAQLTRFPCGGVTIGVALCRGSIDGIATMRFMNTWAKLARRENVEMTPCHDRNVLNSYKTHSGLHDHSEFHPPPPWLGPLGKDTKVVVAIVKLTREQVKKLKHKGNHDSTNTTSPGPGSQPYSTFEVISGHLWRCVSKARYAGKREQPTRLSTLVNCRGRMRPPLPENYAGNTAFPTVTPTCSFGEIMHRPLSYAVGNVRVALERVTGEFVESALDHIAREKDMNLVRYNFHYPAPTVHKGPYKGNPNLFVVSWMNFSFKDADFGWGEPLYFGPGYMDSEGKAFLMNEAKGDGIIVAISLEASHMDAFKKYFYGDIEEGSLISKL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01542 458 Pfam Transferase family 1 446 - -
Phac1g01542 458 Gene3D - 1 205 IPR023213 -
Phac1g01542 458 Gene3D - 211 447 IPR023213 -
Phac1g01542 458 MobiDBLite consensus disorder prediction 232 254 - -
Phac1g01542 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01542 Phac-Chr1 19448835 19451228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01542 2 446 Monolignol Biosynthesis Gene Families AT5G48930 35.683 3.25e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01542 K13065 - gmx:100775549 745.347