Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01514 ATGGTTGGGCAATCAAACCATGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATCGTGGACATTGTGCCTAATCTCAAAATGGGACCTCTCAATTTCATTTCTGGAGACTTTGGCCCATTTACGCCACAGATTGTTACTCAAGTACCGCTGTGGTTGGCCCTTGCTCTCAAGAAGAGAGGCAAGTGCTCCATTCACCCTCCCCAGTGGATGTCTGTTGAGAAGTTGAGTCATGTTTTGGAGACAGAGCGAGACTCTCAAGAGATGTCAGATCAATTGCCTTTCCATTATGTGGAAATTTCAAGACTTCTTTTTGATCATGCACGTGATAACATTCCCAATTTATATATGGTGAGATCTCTAATTGAGGATATAAGAAATGTAAGGTTTCATAAAGTTGAAACAGACTTGGAAGGATTTAATGGTCGTACAATTGCTGTTAAGATAAAAAATTTGTCTGCAATGGAAGTGAATATTGTTCGTCCATTTATTGGAAAAGCTTTACAAGCATTTTATAAGCATGATAGTCCAGAGTTGATACCAGACCCTGAGAGAGTTTCAGATAGGAGACCCCAAGTTGTCAACAATGCCCCTAGAAGACAACTTCGACGATAG 633 0.4092 MVGQSNHELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFTPQIVTQVPLWLALALKKRGKCSIHPPQWMSVEKLSHVLETERDSQEMSDQLPFHYVEISRLLFDHARDNIPNLYMVRSLIEDIRNVRFHKVETDLEGFNGRTIAVKIKNLSAMEVNIVRPFIGKALQAFYKHDSPELIPDPERVSDRRPQVVNNAPRRQLRR* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01514 210 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Phac1g01514 210 Gene3D - 78 186 - -
Phac1g01514 210 FunFam DNA replication complex GINS protein PSF2 78 193 - -
Phac1g01514 210 Pfam GINS complex protein 53 162 IPR021151 -
Phac1g01514 210 SUPERFAMILY PriA/YqbF domain 12 71 - -
Phac1g01514 210 CDD GINS_B_Psf2 13 74 - -
Phac1g01514 210 Gene3D - 12 77 - -
Phac1g01514 210 MobiDBLite consensus disorder prediction 185 210 - -
Phac1g01514 210 CDD GINS_A_psf2 66 182 - -
Phac1g01514 210 SUPERFAMILY GINS helical bundle-like 73 181 IPR036224 -
Phac1g01514 210 PIRSF GINS_PSF2 2 210 IPR007257 GO:0005634|GO:0006260
Phac1g01514 210 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 204 IPR007257 GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01514 Phac-Chr1 18732759 18736653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01514 1 147 Core DNA Replication Machinery Family AT3G12530 65.306 1.35e-70 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01514 K10733 - gmx:100780528 390.963