Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01504 ATGAATAATCAGGCACAAGAGAATGTTAATGAAGGCACTTCCAGCAGAGCAAATAAGCAGAAAGGCAAGGTCTCAAAGCGTGTGAGGTCACGAGCATCATCTCCTCCATGCGCAGCATGCAAGAAAATGAGGAAAAAGTGCAGCAGTGACTGCATCTTTGCACCTTATTTTGGTTCTAGCCAGGGCTCAACAAGGTTTGAAGCAGTGCACAAGGTGTTTGGTGCCAACAACTTGTCAAAACTATTGCTAGAAGTTGAAGAGGCTCACCGTAATGAGGTCATAAACTCCATGTGCTACGAGGCTCAAGCAAGGCTAGCCAATCCTGTTCATGGTTGTGTCTCCACCATTTCTGCTTTACAACAACAGGTGGCAATGTTGCAAGGAGAACTTGTTGTGGTTCAAAATCAATTGATTAATACAAAAAATTTATATGAAAGTCTTCTTCAGAGAACATATCAATGCCAACAACAACCAAACATCAATGTAGTTATGCAACCTACACAGCCCAACAATTTTCCTCCTTCTGCCAATAGCTTGATGAACATGAGCTTTAACCCTGGATTTGATCAGCTTGCAATGCAGACAACACCTTCAACAAACAACATGGAGCCTCATCAGTTTTATGGGCTTCCCCATTTCAACAATGACATAACGCATCTATTTCCATAA 669 0.42 MNNQAQENVNEGTSSRANKQKGKVSKRVRSRASSPPCAACKKMRKKCSSDCIFAPYFGSSQGSTRFEAVHKVFGANNLSKLLLEVEEAHRNEVINSMCYEAQARLANPVHGCVSTISALQQQVAMLQGELVVVQNQLINTKNLYESLLQRTYQCQQQPNINVVMQPTQPNNFPPSANSLMNMSFNPGFDQLAMQTTPSTNNMEPHQFYGLPHFNNDITHLFP* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01504 222 Coils Coil 116 136 - -
Phac1g01504 222 PANTHER LOB DOMAIN CONTAINING PROTEIN 34 171 - -
Phac1g01504 222 ProSiteProfiles LOB domain profile. 35 137 IPR004883 -
Phac1g01504 222 MobiDBLite consensus disorder prediction 1 30 - -
Phac1g01504 222 MobiDBLite consensus disorder prediction 1 19 - -
Phac1g01504 222 Pfam Lateral organ boundaries (LOB) domain 36 134 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01504 Phac-Chr1 18618462 18621724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01504 36 141 AS2 family AT3G03760 64.151 4.52e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac1g01504 LOB 1.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01504 - - pvu:PHAVU_001G115200g 403.29