Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01495 ATGACAATGTACGACCCAATGGCAGAGAGCAGCATGGGTCTGACGTCTCTGACGGATTCACTGTCTGTAACGGAGACAGTGAATGGGACACACAATTTTGAGTTGAAGGGTTACTCTCTAACGAAGGGAATGGGCATTGGAAAATTCATTGCAAGCGAGACATTTACAGTGGGAGGGCACCAGTGGGCCATATACTTCTACCCAGATGGCAAGATCCCCAGTGACAATGGTGTTTATGTTTCCATCTTTGTGGCACTTGTTTCCGAGGGCGTCGATGTTCGTGCACTGTTCGAACTCAAGTTGCACGACCAAAGCGGCAAAGGGAATCATTTGGTTTACAGCCACTTCGGTCGCAGCCTCGAGAATGGCCCTTACACTATCAAAACCCGTGGCTGCATTTGGGGATATAAGCGGTTTTTCAAACGAAAAGATCTGGAGGCATCAACTTTCATCAAGGATGACTGCTTGAAGATCAGTTGTACTGTTGGTGTTCTGGTGATGTCGTGTAGTGATTCTTCTATGTTAAACGCAATACATGTTCCTGAATCTGATATAGAAGAAGATTTAGGGATGATGTTAGATTATGAGGAATTATGTGATGTTACTTTCTCCGTTGGTGGGGAAAGGTTTCGTGCACACAAGCTTATTTTGGGTACTCGGTCAACAGTGTTTGAAACCTGGTTTTCCAATGGGTTAGGAAAGGATGATATGGTGATAGTTGTCAATGACATGGAGCCTAAAGTTTTCAAGGCTTTGCTTCATTTTATATACAAAGACACTCTAATGGAAGATGAAGAGCTCTTTCTGTGGCAATCATGCTCCTATTCTTCGATATCAGAATCATTTCCGGCAAAGTTATTAGTTGCAGCGGAAAAGTTTAACTTGCCAAGATTGAAGCTTATGTGTGAATCAATATTTTGTAGTGAGATATCTATATATTCTGTTCCATATATTCTGGTTTTTGCAGATCGTTATCGTGCTACTGAGTTGAAGTCCATCTGTCAAAAATTCTGTGCTGAAAACTATGATGCTGTGAAGAAATCTGGTGGTTTGGAGTATCTCAGGCAAAATTGTCCGTTGGTGCAAGCAGAGCTGCTAAGCATTGCGGTTGGCGTGGACAAATTTATTGTGGCTGATGATAAGAAACAACCAACCTTAGAAAAAGGTGAAAGTTCAAAGATTCACAGTTCTGATGATAACAACAACAATATTCCATTAGGGTTTACTTTTAAGATTTGGAATGGTGAAGCAAATTAG 1257 0.4153 MTMYDPMAESSMGLTSLTDSLSVTETVNGTHNFELKGYSLTKGMGIGKFIASETFTVGGHQWAIYFYPDGKIPSDNGVYVSIFVALVSEGVDVRALFELKLHDQSGKGNHLVYSHFGRSLENGPYTIKTRGCIWGYKRFFKRKDLEASTFIKDDCLKISCTVGVLVMSCSDSSMLNAIHVPESDIEEDLGMMLDYEELCDVTFSVGGERFRAHKLILGTRSTVFETWFSNGLGKDDMVIVVNDMEPKVFKALLHFIYKDTLMEDEELFLWQSCSYSSISESFPAKLLVAAEKFNLPRLKLMCESIFCSEISIYSVPYILVFADRYRATELKSICQKFCAENYDAVKKSGGLEYLRQNCPLVQAELLSIAVGVDKFIVADDKKQPTLEKGESSKIHSSDDNNNNIPLGFTFKIWNGEAN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01495 418 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 23 365 IPR045005 GO:0016567
Phac1g01495 418 ProSiteProfiles MATH/TRAF domain profile. 28 162 IPR002083 GO:0005515
Phac1g01495 418 ProSiteProfiles BTB domain profile. 199 265 IPR000210 GO:0005515
Phac1g01495 418 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 27 165 IPR008974 GO:0005515
Phac1g01495 418 SUPERFAMILY TRAF domain-like 25 164 - -
Phac1g01495 418 SUPERFAMILY POZ domain 178 308 IPR011333 -
Phac1g01495 418 CDD MATH 29 162 IPR002083 GO:0005515
Phac1g01495 418 Gene3D Potassium Channel Kv1.1; Chain A 175 304 IPR011333 -
Phac1g01495 418 Gene3D - 309 382 - -
Phac1g01495 418 SMART math_3 35 145 IPR002083 GO:0005515
Phac1g01495 418 SMART BTB_4 199 310 IPR000210 GO:0005515
Phac1g01495 418 Pfam BTB/POZ domain 192 308 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01495 Phac-Chr1 18505453 18507180 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phac1g01495 BTB 7.1e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01495 K10523 - gmx:100809683 503.442