Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01486 ATGGCAGAAGAGGATCCAAAGCCTCTGAATTACATCCCCGAGGTTATACTGAAGAAGCGCAAAAGCAGGGAAGCATGGGCATTGAGAAAGAAAGAGCAATTCCAGCACAAGAGTTTTCAGTCCATCAAGAAGCCCGAGGATTTCATCCATGAGTATCGCAACCAGGAAGTGGACCTCCTTAGGATGAAACGGAGGGTGAAGAGGAAAGTTCCTCATGCTAACTCCAACGTATTGATAATCATTCGCATACAGGGGAAAAAGGACATGCATCCAAGGACAAGGAAGGTGTTATACAGCTTGGGTTTGAGGAGTATGTTCAGTGCTGTTTTTGTGAAGCCAAGTGAGGGAATAATGGCCAAGCTGCAGAGGGTAGAACCATTTGTGACCTATGGATATCCAAACCTTAAAAACATAAAGGAGCTAATTTACAAGAAAGGACTTGCAAGGATGGATGGGCGGAAAGTTCCCTTGACAGATAATAACATTATTGATCAGGAATTAGGAAAGTTTGGTGTTGTCTGTCTAGAGGACATGGTGCATCAGATATATAATGCCGGTCCCCACTTTAAGGAAGTTGTCAAATTTATGTGGCCCTTTGTGCTCAACAAGCCAGCTGATGGATTGAAAGGATCAAAAACCCTATACAAGGAGGGTGGAGACACAGGGAACCGTGAGGATCTCATCAACGAACTAATCGATAAAATGAATTAG 711 0.436 MAEEDPKPLNYIPEVILKKRKSREAWALRKKEQFQHKSFQSIKKPEDFIHEYRNQEVDLLRMKRRVKRKVPHANSNVLIIIRIQGKKDMHPRTRKVLYSLGLRSMFSAVFVKPSEGIMAKLQRVEPFVTYGYPNLKNIKELIYKKGLARMDGRKVPLTDNNIIDQELGKFGVVCLEDMVHQIYNAGPHFKEVVKFMWPFVLNKPADGLKGSKTLYKEGGDTGNREDLINELIDKMN* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01486 236 NCBIfam 60S ribosomal protein uL30 16 236 IPR005998 GO:0000463|GO:0003735|GO:0022625
Phac1g01486 236 Pfam Ribosomal protein L30p/L7e 78 128 IPR016082 -
Phac1g01486 236 CDD Ribosomal_L7_archeal_euk 77 236 IPR035808 -
Phac1g01486 236 PANTHER 60S RIBOSOMAL PROTEIN L7 9 236 IPR039699 -
Phac1g01486 236 SUPERFAMILY Ribosomal protein L30p/L7e 78 236 IPR036919 -
Phac1g01486 236 FunFam 60S ribosomal protein L7 77 182 - -
Phac1g01486 236 Gene3D - 77 236 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01486 Phac-Chr1 18319269 18322123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01486 1 236 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 52.227 7.48e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01486 K02937 - gmx:100500005 425.246