Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01462 ATGGAAGATGAGAGGCAGAAAGAGGCAAAGAGTCCAAGGCATGGCCCCGAGAAGAGTGAAGCGGTTCGGTCAAGGTGGACTCCGAAGCCGGAACAAATTCTCATACTCGAATCCATCTTCAACAGTGGCATGGTGAATCCTCCAAAAGATGAAACCGTCAGAATAAGGAAACTGCTTGAGAAATTCGGCACTGTGGGTGACGCCAACGTCTTCTACTGGTTCCAGAACCGACGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGATGCAGCAGGCTGCCGCCACCGCTGCTGCGGTTAACCAGCCTCAGCCACAGCCACAGCCACAGCCTCAGCCTCATGGTCTTGTTGCTGGTGGTGCAATTCAGCATGATCATCATAATCAGGTCAACCTTGTTGCAAGTGAAAGTGCTACTTCAAACATGGGTCTTGGTTCTTGTGTTTCTTATGATCTCCTAGGTGGTTCCTCTTCTTCATCATGTAGTGGTGGTGGACAACAAGGCATGGCTGGTTTCTTTTCTGCTTCTTCTCCTCAAGTGGGTTTTCCTGAAATTATTGACCATACCTCACCTGCATCATCACTTTTGTTCCCTCCTTTTGATCCAAATTTGAGCTTCCAGACTGGATATGGGGGCACCAATGTTTCAGCATTCATCACAGTCTTTATCAATGGGATTGCAACAGAACTTCCAAAGGGACCAATAGACATCAAGACAGTGTTTGGAGAAGATGTTATGTTACTTCATTCCTCTGGAGTGCCAATTCTCACCAATGAATTTGGATTCTTGATGCAGAACCTTCAGCATGGAGAAAGCTACTTTCTGGTTGGCAGAAACTTCAAATCAATTGCTTCTATTCCAAATCATGTGTTGTCACTTTTAATATATATCTGA 891 0.4669 MEDERQKEAKSPRHGPEKSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMMQQAAATAAAVNQPQPQPQPQPQPHGLVAGGAIQHDHHNQVNLVASESATSNMGLGSCVSYDLLGGSSSSSCSGGGQQGMAGFFSASSPQVGFPEIIDHTSPASSLLFPPFDPNLSFQTGYGGTNVSAFITVFINGIATELPKGPIDIKTVFGEDVMLLHSSGVPILTNEFGFLMQNLQHGESYFLVGRNFKSIASIPNHVLSLLIYI* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01462 296 SMART HOX_1 21 88 IPR001356 GO:0003677
Phac1g01462 296 MobiDBLite consensus disorder prediction 1 26 - -
Phac1g01462 296 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Phac1g01462 296 SUPERFAMILY Homeodomain-like 17 90 IPR009057 -
Phac1g01462 296 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 277 IPR044558 GO:0003700|GO:0048830
Phac1g01462 296 Gene3D - 23 90 - -
Phac1g01462 296 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Phac1g01462 296 MobiDBLite consensus disorder prediction 86 102 - -
Phac1g01462 296 MobiDBLite consensus disorder prediction 79 118 - -
Phac1g01462 296 FunFam WUSCHEL-related homeobox 11 23 90 - -
Phac1g01462 296 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01462 Phac-Chr1 17568120 17570663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01462 19 277 Wox Gene Family AT5G17810 46.043 2.04e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac1g01462 Homeodomain 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01462 - - gmx:100818735 331.257