Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01460 ATGGGTTCTTCTTCATGGTGCTTCAATAATGTTGTTGGTGAAGGTTTCGATGGAGTCATGAGTTCACAAGCTCCGCCCTTGGGTCACGACAAGGGGGTTTTGGGTCCAAACCTTGAGATGAGTCTTCAGATGTTGTGCCCTTCAGTGGTTCAGCCGCAGGAGAGCAGGGAGAAAAAGAGAACCAGGGATGAAGGGGTTGCAAACAAGAAGTTGTCTTTGAAACGCGGGGAAGAAGAAGAAGCTAACGGCTTCATTTCAGGGAAAAAGGGGTTCACCAAGCTTTGTGCCAGAGGCCACTGGAGGCCAGCAGAAGATGACAAACTTAAGGAGCTTGTGGCTCAATATGGTCCCCAAAACTGGAACTTGATTGCTGAACATTTAGAAGGAAGATCAGGAAAAAGTTGTAGATTGAGGTGGTTTAATCAGTTAGATCCTAAGATCAACAAAAAGTGTTTCTGTGAGGAGGAAGAGGAAAGGCTTTTGACTGCTCATAAAATGTATGGTAGCAAATGGGCCATGATTGCTAGGCTATTTCCTGGAAGGACAGATAATGCAGTGAAGAACCATTGGCATGTGATAATGTCTAGGAGGCAGAGGGAGCAGTCTAGTGGCGTGTATAGAAGGAGAAAACCTCATAGCAATGAATCTTTTTTAAAGGGTTTGAATCTGACACTGTCTAACAATGCTACTAGTGACGAGTCAACCATCTCAAACACCATTGATGAATCTGCCTCAACATGCACCAATCTCTCCCTGACTCCCTCTTCAGCCAAGTTGAATCCTCCTTTTGGACTCTTACACCAACCAGGAGAATCTAGAGAGGATGTGTGGTTGAACAAGTATTTTGGTGGTTGGAACGGGTCAGAAGCTGTGGGAAAAAGGCTAATGGGTGTGGACCAGGCTAGTTTTTCAGATACAAACTCAGAAGTATCGGTATCTGAGTCAGTTATCACCAATAGGTCCAATCTCTCAATTTCTGAAGAGAAAGAGGGTGAAACTATGGGTGATAAGATTAACATGTCATTCATTGATTTTATTGGAGTAGGAACTACTTAG 1056 0.4403 MGSSSWCFNNVVGEGFDGVMSSQAPPLGHDKGVLGPNLEMSLQMLCPSVVQPQESREKKRTRDEGVANKKLSLKRGEEEEANGFISGKKGFTKLCARGHWRPAEDDKLKELVAQYGPQNWNLIAEHLEGRSGKSCRLRWFNQLDPKINKKCFCEEEEERLLTAHKMYGSKWAMIARLFPGRTDNAVKNHWHVIMSRRQREQSSGVYRRRKPHSNESFLKGLNLTLSNNATSDESTISNTIDESASTCTNLSLTPSSAKLNPPFGLLHQPGESREDVWLNKYFGGWNGSEAVGKRLMGVDQASFSDTNSEVSVSESVITNRSNLSISEEKEGETMGDKINMSFIDFIGVGTT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01460 351 FunFam MYB transcription factor 97 148 - -
Phac1g01460 351 PANTHER MYB PROTEIN-RELATED 97 236 - -
Phac1g01460 351 MobiDBLite consensus disorder prediction 53 71 - -
Phac1g01460 351 Pfam Myb-like DNA-binding domain 97 143 IPR001005 -
Phac1g01460 351 Pfam Myb-like DNA-binding domain 151 192 IPR001005 -
Phac1g01460 351 Gene3D - 152 214 - -
Phac1g01460 351 CDD SANT 100 141 IPR001005 -
Phac1g01460 351 ProSiteProfiles Myb-like domain profile. 144 194 IPR001005 -
Phac1g01460 351 CDD SANT 160 191 IPR001005 -
Phac1g01460 351 Gene3D - 97 148 - -
Phac1g01460 351 SMART sant 96 145 IPR001005 -
Phac1g01460 351 SMART sant 148 196 IPR001005 -
Phac1g01460 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 147 IPR017930 -
Phac1g01460 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 198 IPR017930 -
Phac1g01460 351 ProSiteProfiles Myb-like domain profile. 97 143 IPR001005 -
Phac1g01460 351 MobiDBLite consensus disorder prediction 49 71 - -
Phac1g01460 351 SUPERFAMILY Homeodomain-like 97 190 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01460 Phac-Chr1 17532463 17535387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01460 74 351 MYB Transcription Factor Family AT5G17800 44.912 9.79e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g01460 Myb_DNA-binding 8.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01460 K09422 - gmx:100791795 429.869