Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01400 ATGTATCACGCAAAGAAGTTTTCGTCAGCTAGCATGGTGCCCTATAAATCTCAAGGTGGTGCTGAACAACTTGCAAATGTTGAGGTTTTGGGTGGATCTGCTGCCAAAAATGCCACACCTGCTGGAGGAAGTGGGAAGCAGCGTTTAAGGTGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTCCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTACTTACCTGAATCACCAGCTGATGGTAAAGACTCTAAAGATGAGAAGAGAAATTCTGGAGACAGCTTTTCCGGCGCAGATTCTTCACCGGGAATGCCAATCAATGATGCCTTAAGAATGCAGATGGAGGTACAGAAACGTCTTCATGAGCAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTACAAAAGATCATAGAGGAACAGCAGAAATTAGGTAATACTTTAACAACCTCAGAAACACTTCCTTTGTCGCATGATAAGCACACTCATCCCCATTTGGAGGCTTCTGGATCTAGTGATGCCCTTGCAAGGCCTTTTTCTCCACATAAAAAACAGAGAATCGATGATGGCTTCACTGCTTCCCATGTAAGAAAGACTGAACAAAAGAATGACTGCAATGTTGGTCAGTTGGATCCAAATTTGTATGATGATACTGGGTTTGGATTTGATTTGGAGACAAAAAAGGATGAACATAAGGAGAGTGGACAGATACTTGTCGATGTTCAGGTTGCTATGGTCCAAGCCAGAATCAAATAG 867 0.4221 MYHAKKFSSASMVPYKSQGGAEQLANVEVLGGSAAKNATPAGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDSKDEKRNSGDSFSGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLTTSETLPLSHDKHTHPHLEASGSSDALARPFSPHKKQRIDDGFTASHVRKTEQKNDCNVGQLDPNLYDDTGFGFDLETKKDEHKESGQILVDVQVAMVQARIK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01400 288 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Phac1g01400 288 Coils Coil 137 157 - -
Phac1g01400 288 MobiDBLite consensus disorder prediction 194 213 - -
Phac1g01400 288 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Phac1g01400 288 MobiDBLite consensus disorder prediction 106 123 - -
Phac1g01400 288 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Phac1g01400 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Phac1g01400 288 FunFam Myb family transcription factor 45 103 - -
Phac1g01400 288 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Phac1g01400 288 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 223 IPR044848 GO:0003700
Phac1g01400 288 MobiDBLite consensus disorder prediction 106 136 - -
Phac1g01400 288 Gene3D - 45 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01400 Phac-Chr1 16341769 16345624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01400 35 216 G2-like Transcription Factor Family AT3G04450 46.154 1.56e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g01400 Myb_DNA-binding 2.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01400 - - gmx:100783132 465.307