Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g01398 | ATGTATCACGCAAAGAAGTTTTCGTCAGCTAGCATGGTGCCCTATAAATCTCAAGGTGGTGCTGAACAACTTGCAAATGTTGAGGTTTTGGGTGGATCTGCTGCCAAAAATGCCACACCTGCTGGAGGAAGTGGGAAGCAGCGTTTAAGGTGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTCCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTACTTACCTGAATCACCAGCTGATGACTCTAAAGATGAGAAGAGAAATTCTGGAGACAGCTTTTCCGGCGCAGATTCTTCACCGGGAATGCCAATCAATGATGCCTTAAGAATGCAGATGGAGGTACAGAAACGTCTTCATGAGCAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTACAAAAGATCATAGAGGAACAGCAGAAATTAGGTAATACTTTAACAACCTCAGAAACACTTCCTTTGTCGCATGATAAGCACACTCATCCCCATTTGGAGGCTTCTGGATCTAGTGATGCCCTTGCAAGGCCTTTTTCTCCACATAAAAAACAGAGAATCGATGATGGCTTCACTGCTTCCCATGTAAGAAAGACTGAACAAAAGAATGACTGCAATGTTGGTCAGTTGGATCCAAATTTGTATGATGATACTGGGTTTGGATTTGATTTGGAGACAAAAAAGGATGAACATAAGGAGAGTGGACAGATACTTGTCGATGTTCAGGTTGCTATGGTCCAAGCCAGAATCAAATAG | 861 | 0.4228 | MYHAKKFSSASMVPYKSQGGAEQLANVEVLGGSAAKNATPAGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADDSKDEKRNSGDSFSGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLTTSETLPLSHDKHTHPHLEASGSSDALARPFSPHKKQRIDDGFTASHVRKTEQKNDCNVGQLDPNLYDDTGFGFDLETKKDEHKESGQILVDVQVAMVQARIK* | 287 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g01398 | 286 | FunFam | Myb family transcription factor | 45 | 103 | - | - | |
Phac1g01398 | 286 | Coils | Coil | 135 | 155 | - | - | |
Phac1g01398 | 286 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 45 | 221 | IPR044848 | GO:0003700 | |
Phac1g01398 | 286 | MobiDBLite | consensus disorder prediction | 192 | 211 | - | - | |
Phac1g01398 | 286 | MobiDBLite | consensus disorder prediction | 106 | 134 | - | - | |
Phac1g01398 | 286 | Pfam | Myb-like DNA-binding domain | 49 | 99 | IPR001005 | - | |
Phac1g01398 | 286 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 43 | 103 | IPR017930 | - | |
Phac1g01398 | 286 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 46 | 101 | IPR006447 | GO:0003677 | |
Phac1g01398 | 286 | MobiDBLite | consensus disorder prediction | 106 | 121 | - | - | |
Phac1g01398 | 286 | SUPERFAMILY | Homeodomain-like | 45 | 100 | IPR009057 | - | |
Phac1g01398 | 286 | Pfam | MYB-CC type transfactor, LHEQLE motif | 132 | 178 | IPR025756 | - | |
Phac1g01398 | 286 | Gene3D | - | 45 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g01398 | Phac-Chr1 | 16341769 | 16345624 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g01398 | 42 | 176 | G2-like Transcription Factor Family | AT4G28610 | 57.778 | 1.27e-49 | 167 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Phac1g01398 | Myb_DNA-binding | 2.8e-06 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g01398 | - | - | gmx:100783132 | 456.062 |