Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01397 ATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGTGGGAGCAACACCAAAAGGTGTCCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTACTTACCTGAATCACCAGCTGATGGTAAAGACTCTAAAGATGAGAAGAGAAATTCTGGAGACAGCTTTTCCGGCGCAGATTCTTCACCGGGAATGCCAATCAATGATGCCTTAAGAATGCAGATGGAGGTACAGAAACGTCTTCATGAGCAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTACAAAAGATCATAGAGGAACAGCAGAAATTAGGTAATACTTTAACAACCTCAGAAACACTTCCTTTGTCGCATGATAAGCACACTCATCCCCATTTGGAGGCTTCTGGATCTAGTGATGCCCTTGCAAGGCCTTTTTCTCCACATAAAAAACAGAGAATCGATGATGGCTTCACTGCTTCCCATGTAAGAAAGACTGAACAAAAGAATGACTGCAATGTTGGTCAGTTGGATCCAAATTTGTATGATGATACTGGGTTTGGATTTGATTTGGAGACAAAAAAGGATGAACATAAGGAGAGTGGACAGATACTTGTCGATGTTCAGGTTGCTATGGTCCAAGCCAGAATCAAATAG 705 0.4128 MTVLWMPLHNLVDQIVGATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDSKDEKRNSGDSFSGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLTTSETLPLSHDKHTHPHLEASGSSDALARPFSPHKKQRIDDGFTASHVRKTEQKNDCNVGQLDPNLYDDTGFGFDLETKKDEHKESGQILVDVQVAMVQARIK* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01397 234 Coils Coil 83 103 - -
Phac1g01397 234 MobiDBLite consensus disorder prediction 140 159 - -
Phac1g01397 234 Gene3D - 9 50 - -
Phac1g01397 234 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 18 170 IPR044848 GO:0003700
Phac1g01397 234 MobiDBLite consensus disorder prediction 52 69 - -
Phac1g01397 234 SUPERFAMILY Homeodomain-like 18 46 IPR009057 -
Phac1g01397 234 MobiDBLite consensus disorder prediction 52 82 - -
Phac1g01397 234 Pfam MYB-CC type transfactor, LHEQLE motif 80 126 IPR025756 -
Phac1g01397 234 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 47 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01397 Phac-Chr1 16341769 16345624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01397 27 194 G2-like Transcription Factor Family AT2G01060 52.907 1.48e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g01397 Myb_CC_LHEQLE 7.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01397 - - gmx:100787389 340.502