Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01396 ATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGTGGGAGCAACACCAAAAGGTGTCCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTACTTACCTGAATCACCAGCTGATGACTCTAAAGATGAGAAGAGAAATTCTGGAGACAGCTTTTCCGGCGCAGATTCTTCACCGGGAATGCCAATCAATGATGCCTTAAGAATGCAGATGGAGGTACAGAAACGTCTTCATGAGCAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTACAAAAGATCATAGAGGAACAGCAGAAATTAGGTAATACTTTAACAACCTCAGAAACACTTCCTTTGTCGCATGATAAGCACACTCATCCCCATTTGGAGGCTTCTGGATCTAGTGATGCCCTTGCAAGGCCTTTTTCTCCACATAAAAAACAGAGAATCGATGATGGCTTCACTGCTTCCCATGTAAGAAAGACTGAACAAAAGAATGACTGCAATGTTGGTCAGTTGGATCCAAATTTGTATGATGATACTGGGTTTGGATTTGATTTGGAGACAAAAAAGGATGAACATAAGGAGAGTGGACAGTAA 654 0.4113 MTVLWMPLHNLVDQIVGATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADDSKDEKRNSGDSFSGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLTTSETLPLSHDKHTHPHLEASGSSDALARPFSPHKKQRIDDGFTASHVRKTEQKNDCNVGQLDPNLYDDTGFGFDLETKKDEHKESGQ* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01396 217 Coils Coil 81 101 - -
Phac1g01396 217 MobiDBLite consensus disorder prediction 138 157 - -
Phac1g01396 217 NCBIfam myb-like DNA-binding domain, SHAQKYF class 18 47 IPR006447 GO:0003677
Phac1g01396 217 MobiDBLite consensus disorder prediction 52 80 - -
Phac1g01396 217 MobiDBLite consensus disorder prediction 202 217 - -
Phac1g01396 217 MobiDBLite consensus disorder prediction 197 217 - -
Phac1g01396 217 MobiDBLite consensus disorder prediction 52 67 - -
Phac1g01396 217 Pfam MYB-CC type transfactor, LHEQLE motif 78 124 IPR025756 -
Phac1g01396 217 Gene3D - 8 50 - -
Phac1g01396 217 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 18 167 IPR044848 GO:0003700
Phac1g01396 217 SUPERFAMILY Homeodomain-like 18 46 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01396 Phac-Chr1 16341416 16345624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01396 27 192 G2-like Transcription Factor Family AT2G01060 52.353 7.57e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g01396 Myb_CC_LHEQLE 6.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01396 - - gmx:100787389 345.51