Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01394 ATGTATCACGCAAAGAAGTTTTCGTCAGCTAGCATGGTGCCCTATAAATCTCAAGGTGGTGCTGAACAACTTGCAAATGTTGAGGTTTTGGGTGGATCTGCTGCCAAAAATGCCACACCTGCTGGAGGAAGTGGGAAGCAGCGTTTAAGGTGGACATCTGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTCCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTACTTACCTGAATCACCAGCTGATGACTCTAAAGATGAGAAGAGAAATTCTGGAGACAGCTTTTCCGGCGCAGATTCTTCACCGGGAATGCCAATCAATGATGCCTTAAGAATGCAGATGGAGGTACAGAAACGTCTTCATGAGCAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTACAAAAGATCATAGAGGAACAGCAGAAATTAGGTAATACTTTAACAACCTCAGAAACACTTCCTTTGTCGCATGATAAGCACACTCATCCCCATTTGGAGGCTTCTGGATCTAGTGATGCCCTTGCAAGGCCTTTTTCTCCACATAAAAAACAGAGAATCGATGATGGCTTCACTGCTTCCCATGTAAGAAAGACTGAACAAAAGAATGACTGCAATGTTGGTCAGTTGGATCCAAATTTGTATGATGATACTGGGTTTGGATTTGATTTGGAGACAAAAAAGGATGAACATAAGGAGAGTGGACAGTAA 816 0.4216 MYHAKKFSSASMVPYKSQGGAEQLANVEVLGGSAAKNATPAGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADDSKDEKRNSGDSFSGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLTTSETLPLSHDKHTHPHLEASGSSDALARPFSPHKKQRIDDGFTASHVRKTEQKNDCNVGQLDPNLYDDTGFGFDLETKKDEHKESGQ* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01394 271 MobiDBLite consensus disorder prediction 256 271 - -
Phac1g01394 271 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Phac1g01394 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Phac1g01394 271 MobiDBLite consensus disorder prediction 219 271 - -
Phac1g01394 271 MobiDBLite consensus disorder prediction 219 239 - -
Phac1g01394 271 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Phac1g01394 271 Pfam MYB-CC type transfactor, LHEQLE motif 132 178 IPR025756 -
Phac1g01394 271 Coils Coil 135 155 - -
Phac1g01394 271 MobiDBLite consensus disorder prediction 192 211 - -
Phac1g01394 271 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 220 IPR044848 GO:0003700
Phac1g01394 271 MobiDBLite consensus disorder prediction 106 134 - -
Phac1g01394 271 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Phac1g01394 271 FunFam Myb family transcription factor 45 103 - -
Phac1g01394 271 Gene3D - 45 104 - -
Phac1g01394 271 MobiDBLite consensus disorder prediction 106 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01394 Phac-Chr1 16341416 16345624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01394 42 176 G2-like Transcription Factor Family AT4G28610 57.778 6.37e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g01394 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01394 - - gmx:100783132 456.062