Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01383 ATGGGAAGCCCTCAATCCAATTTGCCACCCGGTTTTAGGTTCCACCCAACAGATCAAGAGCTCATTCTTCACTACCTTAGTAAAAAGGTTGCATCCATACCCTTGCCCGTTTCCATCATTGCCGAGGTTGATATCTACAAGTTAGATCCATGGGACTTGCCAGCAAAGGCAACGTTTGGGGAGAAAGAATGGTATTTTTTCAGTCCTAGAGACCGAAAGTACCCAAATGGGGCAAGGCCAAACAGGGCAGCTGCTTCAGGATATTGGAAGGCCACTGGCACAGATAAGACCATAGTGACATCATTGCAAGGTGGAGCAGCCCAAGAGAACGTTGGTGTGAAGAAGGCTTTGGTGTTCTACAAAGGAAGACCCCCAAAGGGTGTCAAGACCAATTGGATCATGCATGAATATCGCCTTGTAGACAACAACAAACCCATTAAGCTCAAAGACTCCTCCATGAGATTGGATGATTGGGTGTTGTGTCGGATTTACAAGAAGTCGAAACATGCTCTAACTTCAGCGGAGGCAACAATAGGGGTTGGTGAGGTAGATCAAGCAGAGGAACACCTATTCAAAGAGACCCTTTTACCAATCTTAAATTTTCCAACACCTCCTCCTCAGACCACATTGATATCTCAAAAATCTGTGTCCTTTTCCAACCTGTTGGATGCCATGGACTACTCTGTACTAAGCAGTTTCTTATCAGAGAATCATTCCAACCCTGCAGGGATTGGATCAAGTGCAGGCTTCAACAGTGAGAATTTGGAACAACAATCCTCTCCAATCAACAACCCCACCAATAGCTACACGTTTCAGAAGAACACCCAATTGAACCCTTCACTCTCCAACATGGAAAGCATGAGGCCAAAGCGCCAAGTTTCAAACATTGATGATGAAACTCTCTACCCATCAAAGAAATACCTGAGTTCCTCTTGCAACTTTCCTACATACGAGAATCCACAATGGAACTACCTCGTCAAACAGTCTTTACTGAATCAGCGGTTACTGCTTGGTCCTCAGCTTCAATTTCAAGGATAA 1038 0.448 MGSPQSNLPPGFRFHPTDQELILHYLSKKVASIPLPVSIIAEVDIYKLDPWDLPAKATFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLQGGAAQENVGVKKALVFYKGRPPKGVKTNWIMHEYRLVDNNKPIKLKDSSMRLDDWVLCRIYKKSKHALTSAEATIGVGEVDQAEEHLFKETLLPILNFPTPPPQTTLISQKSVSFSNLLDAMDYSVLSSFLSENHSNPAGIGSSAGFNSENLEQQSSPINNPTNSYTFQKNTQLNPSLSNMESMRPKRQVSNIDDETLYPSKKYLSSSCNFPTYENPQWNYLVKQSLLNQRLLLGPQLQFQG* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01383 345 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
Phac1g01383 345 MobiDBLite consensus disorder prediction 244 265 - -
Phac1g01383 345 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Phac1g01383 345 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 266 - -
Phac1g01383 345 SUPERFAMILY NAC domain 4 166 IPR036093 GO:0003677|GO:0006355
Phac1g01383 345 FunFam NAC transcription factor 56 17 171 - -
Phac1g01383 345 Gene3D NAC domain 17 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01383 Phac-Chr1 16033276 16035676 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01383 4 345 NAC Transcription Factor Family AT3G04070 51.558 8.42e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac1g01383 NAM 8.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01383 - - vun:114194335 628.632