Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01369 ATGAGTTTTCAAGACATCCAAGGTGGGCCCCACCCTCCCTCTCGCCGGAGCCAGTCACCGGCGCAGGCCGTCGCCGCCGGAATTTTCCAGATCAACACCGCCGTCGCCACTTTCCGGCGGCTCGTTGATGCCCTCGGAACCGTTAAAGACACTTCCGAACACCGTCAGAAACTGCACAATACGAGGCAGAGGATATTGCAACAGGTGAAGGATACTTCTGCTAAGCTCAAATCCTTGAGTGAATCTGATCGTGATGCTAATTCCAATGCTAGTCAGAAAATTGAAGATGCTAAGCTTGCTAGAGATTTTCAAACGACATTGCAAGAGTTTCAGAAAGTACAGCAGCTTGCCTCTGAGCGTGAATTGGCTTACACCCCTGCCTCCCCGTCTTCTACTTTACCAATAAGCTCTGGCTCTGGTGAAGAATCGACTGGAATAGATGTTGAAAGTCAACCTTTTATTAGAGAGCAGAAGAGGCAAGAGATACTTCTATTAGATAATGAAATATCATTCAACGAGGCCATGATTGATGAAAGAGAACAGGGAATTAGAGAGGTAGAAGAGCAAATTGGACAAGCAAATGAAATATTCAAGGACCTTGCTGTTCTTGTTCATGATCAGGGAGTTGTTATTGATGACATTCAATCAAATATTGATGCTTCTGCTGGTGCAACAACCCAAGCTAGGGTCCAACTAGCCAAGGCTTCTAAAAGTGTAAAATCCAGAACCTCATGGTGTTGGTGGGTGCTTGCAATTTTTGTGGTCGTGCTGGTCATATTACTTATTGTACTCATTCTTTAG 801 0.4532 MSFQDIQGGPHPPSRRSQSPAQAVAAGIFQINTAVATFRRLVDALGTVKDTSEHRQKLHNTRQRILQQVKDTSAKLKSLSESDRDANSNASQKIEDAKLARDFQTTLQEFQKVQQLASERELAYTPASPSSTLPISSGSGEESTGIDVESQPFIREQKRQEILLLDNEISFNEAMIDEREQGIREVEEQIGQANEIFKDLAVLVHDQGVVIDDIQSNIDASAGATTQARVQLAKASKSVKSRTSWCWWVLAIFVVVLVILLIVLIL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01369 266 Gene3D - 167 266 - -
Phac1g01369 266 MobiDBLite consensus disorder prediction 1 22 - -
Phac1g01369 266 FunFam Syntaxin-22 like 166 266 - -
Phac1g01369 266 SUPERFAMILY t-snare proteins 19 228 IPR010989 GO:0016020|GO:0016192
Phac1g01369 266 PANTHER SYNTAXIN 21 256 IPR045242 -
Phac1g01369 266 CDD SNARE_Qa 176 234 - -
Phac1g01369 266 Pfam Syntaxin-like protein 25 123 IPR006011 GO:0016020
Phac1g01369 266 Gene3D - 12 129 - -
Phac1g01369 266 MobiDBLite consensus disorder prediction 122 147 - -
Phac1g01369 266 SMART tSNARE_6 168 235 IPR000727 -
Phac1g01369 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Phac1g01369 266 MobiDBLite consensus disorder prediction 124 146 - -
Phac1g01369 266 FunFam Syntaxin-22 like 15 128 - -
Phac1g01369 266 SMART SynN_4 8 122 IPR006011 GO:0016020
Phac1g01369 266 Pfam SNARE domain 210 261 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01369 Phac-Chr1 15541321 15544133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01369 1 253 SNARE and Associated Proteins AT5G46860 57.529 5.24e-95 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01369 - - gmx:100787141 425.246