Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01314 ATGGGCACAGTAGAAATGATCATTGCATTTCACATGAAGCCTTTGGTCTTTTTCCTTTGGCTCTTTCTCCCCTCATTGGGCAAACACTTGCTAAGCTGTGAGACACCTTCACCTGATTCCTCTGGCTACCATTGCATTCAAAATCTCTCAAACAACCAATGTGCAACATTTGCACTCTTTCTCACTAACTCCTACTACTCCTCTCTCTCCAACCTCTCCTCTTACTTGGGACTCAATAAGTTTGTTCTAGCACAAGCAAATGGATTCTCTCCACACACTGAGTTCCTCTCCCTTCATCAACCCCTTCTCATACCAATTCATTGCATTTGCAAAGGTGGCTTCTCTCATGCTCACCTAACCAAAACTACTATCAAAGGAGAGAGCTTCTATGACATTGCTCAATCACTAGAGGGCTTGACAACCTGCAAGGCTATTAGGGACAACAACCCTGGTGTCTCACCTTGGAATCTTGATGACCAACTCAGCTTGATTATCCCATTGAGTTGTTCTTGCCCGTTTTCATCCCAACTTAGACCGCAGCCCAAGCTTCTGCTTTCTTATCCTGTAAGTGAAGGTGATACAATTTCCAATTTGGCCTCCAAGTTTAATATTACTCAACAAGCTATTGTCTCTGCTAATAACATATCATTACAAGGTCTCGGGGCTAGAACTGCTCTTCCACCCTTTACCTCTATTCTCATTCCACTTAATGGTAAACCAATCATTGGTCCTTTGGTTAAACCCAAGGAACCTAATTCTAGCTTTCAAACAAACAGCATCCCTGTAATAAGTCCACACAACAAGTCACCAATGTGGAAGACTGAATTGTTCATTGGGCTAGCTGGGGTTGCACTTGGAGTCTGCATTGCTCTTGCTGCAGCCTTTTTCTTCATCAGATTGAAGCACAAGAAGGGGGAAGAGAATTCGTGCAAAGGAGATATGGAGCTGCAACATCTGAATCAAAGTGTGAGAACCACCTCCACTAGTGACAAGAAAGTTTCATTTGAGGGGTCTCAGGATACTCTTGATGTGAAAATTGTTGATGCCACATCGCGCAAGATGTTGCTGGAGACATACACCATTGAGAATATGAGAAAAGCAACTGAAGATTTCAGCTCAAGCAATCACATTGAAGGATCAGTATATCACGGCCGTCTGAATGGGAAGAACATGGCAATCAAGAGAACAAAGGCAGCAACAGTGTCAAAGATAGATCTTGGCCTTTTCCATGATGCACTTCACAACCACCCCAACATACTTAGGCTTCTTGGAACAAGCATGTCAGATGGGAAGGAGCAAGAAGAGTCATTTTTAGTTTTTGAGTATGCCAAAAATGGTTCATTGAAAGACTGGCTTCATGGTGGATTAGCCATCAAGAACCAATTCATTGCTTCTTGCTACTGTTTCCTGACATGGAGCCAGAGGCTCAGGATCTGCCTTGATGTGGCCAGTGCCTTGCAGTATATGCACCATGTTATGAATCCCTGCTATGTGCATAGAAATGTAAAGAGCAGGAACATCTTTTTGGATGAAGAATTTGGTGCCAAGATAGGGAATTTTGGTATGGCAGGCTGTGTTGAGCATGACACTGAGGATCCACACTTCTATTCCACCAACCCCGCCTCTTGGAGCCTTGGTTATTTGGCACCTGAATATGTGCACCAAGGTATAATTTCCCCAAGCATTGATATCTTTGCCTATGGGGTGGTTTTGCTAGAGGTTTTATCTGGTCAAACTCCTATAAGCAGGCCTAATGAGAAGGGAGAAGGAAGCATTTGGCTCACGGATAAAATCAAGTCCATCTTGGTGTCTGAAAATGTGAATGAACTAAGGGGTTGGATAGACAGTGCATTAGGGGAGAACTATTCATTCGATGCAGCAGTGACCATTGTCAACATTGCAAGAGCTTGTGTGGAGGAGGATTCTTCTTTGAGACCAAGTGCAAGGGAAATTGTTGAGAAGCTATCGAGATTGGTGGAGGAATTACCAGAAGGGGAACAACACATGTCAATGAGTGAAAGCTCTAGCAAACCTCTGGTGAAGGCAGTGGAAAACAACAATCTTGAGTAA 2070 0.4353 MGTVEMIIAFHMKPLVFFLWLFLPSLGKHLLSCETPSPDSSGYHCIQNLSNNQCATFALFLTNSYYSSLSNLSSYLGLNKFVLAQANGFSPHTEFLSLHQPLLIPIHCICKGGFSHAHLTKTTIKGESFYDIAQSLEGLTTCKAIRDNNPGVSPWNLDDQLSLIIPLSCSCPFSSQLRPQPKLLLSYPVSEGDTISNLASKFNITQQAIVSANNISLQGLGARTALPPFTSILIPLNGKPIIGPLVKPKEPNSSFQTNSIPVISPHNKSPMWKTELFIGLAGVALGVCIALAAAFFFIRLKHKKGEENSCKGDMELQHLNQSVRTTSTSDKKVSFEGSQDTLDVKIVDATSRKMLLETYTIENMRKATEDFSSSNHIEGSVYHGRLNGKNMAIKRTKAATVSKIDLGLFHDALHNHPNILRLLGTSMSDGKEQEESFLVFEYAKNGSLKDWLHGGLAIKNQFIASCYCFLTWSQRLRICLDVASALQYMHHVMNPCYVHRNVKSRNIFLDEEFGAKIGNFGMAGCVEHDTEDPHFYSTNPASWSLGYLAPEYVHQGIISPSIDIFAYGVVLLEVLSGQTPISRPNEKGEGSIWLTDKIKSILVSENVNELRGWIDSALGENYSFDAAVTIVNIARACVEEDSSLRPSAREIVEKLSRLVEELPEGEQHMSMSESSSKPLVKAVENNNLE* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01314 689 Gene3D Phosphorylase Kinase; domain 1 344 442 - -
Phac1g01314 689 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 26 662 - -
Phac1g01314 689 SMART LysM_2 186 235 IPR018392 -
Phac1g01314 689 Pfam LysM domain 187 219 IPR018392 -
Phac1g01314 689 ProSiteProfiles LysM domain profile. 185 234 IPR018392 -
Phac1g01314 689 CDD LysM 186 216 IPR018392 -
Phac1g01314 689 Gene3D Transferase(Phosphotransferase) domain 1 443 679 - -
Phac1g01314 689 MobiDBLite consensus disorder prediction 663 689 - -
Phac1g01314 689 ProSiteProfiles Protein kinase domain profile. 344 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01314 689 FunFam PTI1-like tyrosine-protein kinase 3 443 669 - -
Phac1g01314 689 Gene3D LysM domain 185 235 IPR036779 -
Phac1g01314 689 Pfam Protein kinase domain 379 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01314 689 SUPERFAMILY Protein kinase-like (PK-like) 354 655 IPR011009 -
Phac1g01314 689 MobiDBLite consensus disorder prediction 668 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01314 Phac-Chr1 14471616 14474303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01314 34 681 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.501 3.59e-143 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phac1g01314 Pkinase 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01314 - - gmx:100816082 1204.12