Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01274 ATGGCGATGGAAGTGGAGCACAATCAGAATCAGCAATTAGGGTTTCCGTTCTGGAAACCGCTCCGTCGCAGGTTCGGACCCGACTCTCCTTTCTTCGCTCCCGGTAACCTCGAACGAGAACTTCTTGCTAAACAGGTTGCTTTGGAATTGACAGAAGAGAAGGATCAGCTTGAGAAATGGATGCAAGAGGAAGAAGGAAGGGAAATCTTTTGTCCCATTGTTGGTTGTGGTGCACGCTTGACTTCAATGGATGACTTCGAAAATCACTATAATGCAAGGCATACTGCATCTTGTTCTGTGTGCTCTAGAGTCTACCCAACGTCGCGGTTGCTCAGCATACATGTATCTGAAGTGCATGATTCTTTCTTTCAGGCAAAAGTTGCACGTGGTTACGATATGTATGAATGCTTGGTGGAAAGGTGTGGTTTGAAATTCAAAAGCTACAATCGTAGGCATCAGCATCTAGTTGACAAGCATAAATTCCCCACCTCATTTGAGTTTTTCAAGAAGGCTAAACCATCTAAGAAACAGAGATTGAAGTCCCAACACAAAAAAGCTGTTCCTAAGGAGGATGCTGCAGGAATGATGGAAGTGGAAAACGCAGCCGTGGATGACCTTGTTTCAGCAGTCTCTAAACTGAGCACTTCTGACTCCACCCCTTCATCTATCAGCTTTGGTCGCCGCAGCAAAGGCTTGTCATTTGTCCCTCGAACTGTTCGGCCCAGAGATCAATCAAACTCAGCGGAATCTGAGACAAAGAGATAA 765 0.4562 MAMEVEHNQNQQLGFPFWKPLRRRFGPDSPFFAPGNLERELLAKQVALELTEEKDQLEKWMQEEEGREIFCPIVGCGARLTSMDDFENHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKVARGYDMYECLVERCGLKFKSYNRRHQHLVDKHKFPTSFEFFKKAKPSKKQRLKSQHKKAVPKEDAAGMMEVENAAVDDLVSAVSKLSTSDSTPSSISFGRRSKGLSFVPRTVRPRDQSNSAESETKR* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01274 254 Coils Coil 43 67 - -
Phac1g01274 254 SMART c2h2final6 134 159 IPR013087 -
Phac1g01274 254 SMART c2h2final6 96 119 IPR013087 -
Phac1g01274 254 SMART c2h2final6 69 94 IPR013087 -
Phac1g01274 254 ProSitePatterns Zinc finger C2H2 type domain signature. 136 159 IPR013087 -
Phac1g01274 254 MobiDBLite consensus disorder prediction 213 228 - -
Phac1g01274 254 ProSitePatterns Zinc finger C2H2 type domain signature. 98 119 IPR013087 -
Phac1g01274 254 PANTHER UNCHARACTERIZED 11 240 IPR039258 -
Phac1g01274 254 MobiDBLite consensus disorder prediction 213 254 - -
Phac1g01274 254 ProSitePatterns Zinc finger C2H2 type domain signature. 71 94 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01274 Phac-Chr1 13675367 13678596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01274 1 252 C2H2 Transcription Factor Family AT5G14140 62.879 1.94e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g01274 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01274 - - gmx:100819557 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01274 1 13675367 13678596 Phac1g01274 1 13675367 13678596 ECH