Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01254 ATGAACTCAAGGGCCACCTCAGAGAGTGAGACATTGTATTGTGTCTATGTAGCGATTGGACAGAAATGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAAAAGCGAATGCTTTAGAATATTCCATTCATGTAGCAGCCACCGCTTCGGATCCTGCACCTCTGCAATTTCTGGCCCCATATTCTAGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTAATAATCTATGATGATCTTAGTAAACAGGCCGTGGCATATCGACAAATGTCATTATTGTTACGTCGACCACCAGGTTGTGAGGCTTTCCCAAGCGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGTGCAGGTAGCTTGACCGCCTTACCCGTCATTGAAACACAAGCGGGAGACGTATCGGCCTATATTCCAACCAATGTGATCTCCATTACTGATGGACAAATATGTTTGGAAACAGAGCTCTTTTATCGTGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTTAAAACTTGAATTGGCACAATATCGCGAAGTCGCCGCCTTTGCTCAATTTGGCTCAGACCTTGATGCTGCGACTCAGGCATTACTCAATAGAGGTGCAAGGCTTACAGAAGTACTGAACAACCACAATATGCACCACTTCCAATTGAAAAACAAATTCTAG 768 0.4466 MNSRATSESETLYCVYVAIGQKCSTVAQLVQILSKANALEYSIHVAATASDPAPLQFLAPYSRCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGCEAFPSDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLNNHNMHHFQLKNKF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01254 255 Gene3D - 1 192 IPR027417 -
Phac1g01254 255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 191 IPR027417 -
Phac1g01254 255 Gene3D - 193 255 IPR038376 -
Phac1g01254 255 FunFam ATP synthase subunit alpha, mitochondrial 1 192 - -
Phac1g01254 255 Pfam ATP synthase alpha/beta chain, C terminal domain 192 253 IPR000793 GO:0015986
Phac1g01254 255 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 7 185 IPR000194 GO:0005524
Phac1g01254 255 ProSitePatterns ATP synthase alpha and beta subunits signature. 176 185 IPR020003 GO:0005524
Phac1g01254 255 CDD ATP-synt_F1_alpha_C 196 241 IPR000793 GO:0015986
Phac1g01254 255 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 194 244 - -
Phac1g01254 255 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 251 IPR005294 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01254 Phac-Chr1 13610559 13611326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01254 8 198 Primary Pumps ATPases(2) AT4G38510 26.562 2.15e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01254 K02132 - gmx:15308608 449.514