Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01236 ATGGAAGTGTTAAACACAGTTGAAGGCAAGAGCTATAGGCTCCCAGTTGGGTACAGGTTCGACCCCACTGATGAAATTCTTGCAGGCTACTACCTCAGGAAGAGGATCATGGCACAGCCACTCCCTAATGACCTCATCCAAGACTGTGATGTTCACCAGACTGAGCCTTGGGCGCTCCCAGGAGGTGAAAAGTATATGAATTGGCAGAGGTTTTTCTTCTATGATGTGAGGACCCATGTCTTTGAAAACCCTGAAAAGAGAGATGCTGGGAAAGGCCAATGGAAAGTAGTGGAGAAAGATCAAGAGGTTGAGTTTCCTGACGAACAAGTCATTGCAAAAAGGAGCGTTCTGGTTTACTGGAAAGCCAAGGGCAACTCTCTTGCCAAAACAAATTGGGTGATGCATGAGTTTCGTCTTGCCCTAAAGTCACATCCATCCAAGATGACAGCTATGGCTGTGTGCCGCATATTCGAAACAAAGCGGGGAAAGAAGGCAAAAGGGTCTGAAGGGGTGACCTCTAACAGGAGCAATGTTGAAGAAGCTATGGATGTGACACCCACTGTCATTGATTTCACAGTGGAGTGTGGCACTGAGACTGGTCCTCCCCCTCCTGGGACCCCCTGA 624 0.484 MEVLNTVEGKSYRLPVGYRFDPTDEILAGYYLRKRIMAQPLPNDLIQDCDVHQTEPWALPGGEKYMNWQRFFFYDVRTHVFENPEKRDAGKGQWKVVEKDQEVEFPDEQVIAKRSVLVYWKAKGNSLAKTNWVMHEFRLALKSHPSKMTAMAVCRIFETKRGKKAKGSEGVTSNRSNVEEAMDVTPTVIDFTVECGTETGPPPPGTP* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01236 207 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Phac1g01236 207 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Phac1g01236 207 SUPERFAMILY NAC domain 10 158 IPR036093 GO:0003677|GO:0006355
Phac1g01236 207 ProSiteProfiles NAC domain profile. 14 159 IPR003441 GO:0003677|GO:0006355
Phac1g01236 207 PANTHER NAC TRANSCRIPTION FACTOR 56 14 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01236 Phac-Chr1 13051393 13053171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01236 10 190 NAC Transcription Factor Family AT2G18060 33.155 8.96e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac1g01236 NAM 1.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01236 - - vum:124846897 331.257