Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01229 ATGTCTTTCTATTGTTTTTTGCTTTACTTGTATACTCTAGTCATCATAACTTGGGTTGATACAGGAAATGGACCAGAAGAAAACCCAAAAGAGGAGGGCGAATGTCCTCCTCATGAGGCCCGGATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGAGATGAAACCTTTATTGGGCAAGGTGGATTTGGCATTGTTTACAAGGGAATGATTGGGGAAAATCAGGTTGTAGCTGTTAAAAGACTTGATACTACAGGTGTCCAAGGGGAGAAAGAATTTCTGGTGGAAGTTCTCATGCTTTCCCTTCTACGCCATTCCAACCTTGTTAATATGATTGGTTACTGTGCGGAAGGGGATCAACGTCTTCTTGTGTATGAGTACATGGCTTTGGGATCCCTAGAATCTCATCTTCATGATGTTTCTCCTGATGAAGAACCACTTGATTGGAATACCAGAATGATGATAGCCTGTGGGTCAGCAAAAGGACTCCATTATCTGCACGATGAAGCAAAGCCCTCTGTTATATACAGGGATCTTAAAACTTCCAACATACTATTGGATGAAGATTTCCATCCAAAACTTTCTGATTTCGGGCTTGCAAAATTTGGTCCAACGGGAGATGAATCATATGTTGCCACTAGGGTCATGGGAACACAAGGTTACTGTGCCCCTGAATATGCCACTAGTGGAAAATTAACGAAGAGATCTGACATTTACAGTTTTGGGGTTGTGTTATTGGAACTAATTACTGGACGCAAAGCATACGATTGTAACCGTGGCACTGAAAAGCATCTGGTAGACTGGGCACGTCCAATGTTCAGAGAGAAAAGGAGTTTCCCTAGATTGGTAGATGCACGGCTTCAAGGCAAGTACCCAGGATCTGGTCTAACGATGGTCATTGAATTGACAGCCATGTGTCTTCGTGAAGAGCCACATCAACGGCCTAATGCAGGTGATATAGTGGAAGCTCTGGAGTTCTTGTCATCCAAGCAATATTCCCCAAAAGTGTTGAACACAGTTAACAACACAGCTGAGATGGAGAGTGGAGAGTCCTCAAATGAAACGACTGCGATTTTGCCCAAAGAATCAGTAAGAGAGCGAGCTGTTGCAGAAGCCAAGCTGTGGGGGGAGACATGGAGGCAGAGACGACAAAGTCAGCAAAGCAGTCCTAAAGAAGCATATAGGTTGTGA 1200 0.435 MSFYCFLLYLYTLVIITWVDTGNGPEENPKEEGECPPHEARIFTFRELATATKNFRDETFIGQGGFGIVYKGMIGENQVVAVKRLDTTGVQGEKEFLVEVLMLSLLRHSNLVNMIGYCAEGDQRLLVYEYMALGSLESHLHDVSPDEEPLDWNTRMMIACGSAKGLHYLHDEAKPSVIYRDLKTSNILLDEDFHPKLSDFGLAKFGPTGDESYVATRVMGTQGYCAPEYATSGKLTKRSDIYSFGVVLLELITGRKAYDCNRGTEKHLVDWARPMFREKRSFPRLVDARLQGKYPGSGLTMVIELTAMCLREEPHQRPNAGDIVEALEFLSSKQYSPKVLNTVNNTAEMESGESSNETTAILPKESVRERAVAEAKLWGETWRQRRQSQQSSPKEAYRL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01229 399 MobiDBLite consensus disorder prediction 347 366 - -
Phac1g01229 399 FunFam probable serine/threonine-protein kinase RLCKVII 27 130 - -
Phac1g01229 399 ProSiteProfiles Protein kinase domain profile. 55 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01229 399 SUPERFAMILY Protein kinase-like (PK-like) 36 330 IPR011009 -
Phac1g01229 399 Gene3D Phosphorylase Kinase; domain 1 26 130 - -
Phac1g01229 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Phac1g01229 399 PANTHER OS07G0668900 PROTEIN 32 338 - -
Phac1g01229 399 CDD STKc_IRAK 61 328 - -
Phac1g01229 399 FunFam Serine/threonine-protein kinase PBS1 131 346 - -
Phac1g01229 399 Gene3D Transferase(Phosphotransferase) domain 1 131 353 - -
Phac1g01229 399 SMART serkin_6 55 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01229 399 MobiDBLite consensus disorder prediction 347 362 - -
Phac1g01229 399 Pfam Protein kinase domain 56 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g01229 399 ProSitePatterns Protein kinases ATP-binding region signature. 61 83 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01229 Phac-Chr1 12889214 12892433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01229 40 392 Glycoside Hydrolase AT3G07070 56.056 1.83e-135 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac1g01229 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01229 K13430 - gmx:100805675 611.683