Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01219 ATGGAGAATAATGACCTCGCAAAGAATTCTGGCGCTCACAACGCCGGTGACGCGATGCCTCCTCGCGATGCTAAACATGACGGTGCCGCCGCCCAAGCGGAACCGTCGTCCCCAACGCCGCATGGTCAGGCGGAGGAGGAACAGAAGAAAGAAGAAACCGCCGCGTCTACTCCGCAAAGCCTCGACCAAATTGCTCAAGAGATTGACCAATTCGTGAGGAGTCTTAAAAACGTTGGAAATGCGCAGAACTTTGCGATTCCTGACTTCAGTGAAAGGTACTTGGATCTGGTGGAAGAGAAGATAATGAAATACGACGCAGGTGAAGGTAAACCGAAATGGGGCGAGGTGTCGGAGGAAGATTCGTGGTTGGTGGACAACGCGAATCGGTTTTCAAAACTGATGACATTGGTGATTGATAATTATCCTGATCATGAACCAGAGAAGATCAGCGGTGCACAAGTCTCGATGATGAACCGCATTACCTCAATTCACCAGCGTTTGATGACGTATTTGGAGGAGGACTTCCGGTTTCTGATGGAAGAATCAAGAATCCCAACTGAATTGGATCCCGGAGGAAATAATCAGAACAGCATCGATACCAAAAGAAAACAACACATGGCAGCATCGGAACAACAAGAGGTGGTGCATGAACAAGAAGGTAGTGAACAAGACACGTATTTCCCGGGGTACTCGGAGGAGACGATTGCAAGCCTAAGTAAGATCGCCAGAGAGATGATATTCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTATATCATTTCGCGGAGGAACGCCTTCGAGGAGATTAACCAGAAGCTAGGGTTAGAGAGGATCAGCATCGACGAGCTGGTGACGAAGGTGCCGTGGGATACTCTGGCCAGGGACATGATCCCTGCCTGGATCAACACGCTCAAACAGTACGCGGCAGTGTACTTCCCCGGCGAGCGGAAGCTGACCGAGGCCGTGTTCGCAGAGAAACACACCGTGGCGGCGGGACTCTTAAGCAGCCTCTCCCGCGGCGTGGTGATTCAGCTTCTCAACTTCGCGGAGGGTGCCGCCATGACGAAGCGAGCCGGAGAGAAGCTATTCAAGCTCCTGGACATGTACGAGAGCCTCTGCGAGGTGATACCCATCGTGGACAGACTCTTTCCAGAAGAGTCCGTCGAGGAGATGGAGACAGAGATGACCCTTGCCAAGTCCAGACTTGGCGAGGCATCTATCTACATCTTCTGCGAGCTGGAGAACCAGATTAAATCGGAGACCGCGAAAACTGCCGTACCCGGTGGCGCAGTTCACCCCCTCACACGCTACATCATGAACTATCTCAACATAGCAGGGGACTACAAGGAAACCCTAGAGCAGGTTTTCATGGAGCATTGGAAGAGGAACCGTGCGGATTCAACAAGCAAGCCTGCAGTGCTGAAAAGGGACGGGGGTTGGGACAAGGAAACACCATCTCCATTCGCAACACAGGTGTTGAGGGTGATGGACTTGCTAGACTCCAGCCTGGAGGGGAAGGCGCGTCTGTACAAAGAGGTGGCGCTGAGCAACTTCTTTATGATGAACAATGGGAGGTACATTCTGCAGAAGATAAAGGGTTCTAGCGAGATGAGCAAGGTGATGGGCGACAATTGGATCAGGAAGAAGTCATCAGAGCTGAGAAACTACCACAAGAACTACCAGAGGGAGACGTGGAACAGGGTGCTGCAGTGTCTGAACCACGAAGGGTTGAGCGTGAATGGGAAGGTGCACAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAACACGTTGTTTGATGAGATTCACAAGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCCATCTCTGCAGTGATCATCCCGGCTTACCGATCATTCATTGGGAGGTTCGCCCAGACTTTTGATCCAGGGAGACAGACAGAGAAGTATATAAAGTACCAAGCTGAAGACATTGAGACTTACATTGATGAGTTGTTTGATGGGAAGCCTCACCAATCCATTGGAAGAAGGAGAACATAA 2046 0.5161 MENNDLAKNSGAHNAGDAMPPRDAKHDGAAAQAEPSSPTPHGQAEEEQKKEETAASTPQSLDQIAQEIDQFVRSLKNVGNAQNFAIPDFSERYLDLVEEKIMKYDAGEGKPKWGEVSEEDSWLVDNANRFSKLMTLVIDNYPDHEPEKISGAQVSMMNRITSIHQRLMTYLEEDFRFLMEESRIPTELDPGGNNQNSIDTKRKQHMAASEQQEVVHEQEGSEQDTYFPGYSEETIASLSKIAREMIFGGYESECCQVYIISRRNAFEEINQKLGLERISIDELVTKVPWDTLARDMIPAWINTLKQYAAVYFPGERKLTEAVFAEKHTVAAGLLSSLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMYESLCEVIPIVDRLFPEESVEEMETEMTLAKSRLGEASIYIFCELENQIKSETAKTAVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFMEHWKRNRADSTSKPAVLKRDGGWDKETPSPFATQVLRVMDLLDSSLEGKARLYKEVALSNFFMMNNGRYILQKIKGSSEMSKVMGDNWIRKKSSELRNYHKNYQRETWNRVLQCLNHEGLSVNGKVHKPVLKERFKSFNTLFDEIHKTQSSWVVKDEQLQSELRVSISAVIIPAYRSFIGRFAQTFDPGRQTEKYIKYQAEDIETYIDELFDGKPHQSIGRRRT* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01219 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 94 670 IPR004140 GO:0000145|GO:0006887
Phac1g01219 681 MobiDBLite consensus disorder prediction 203 220 - -
Phac1g01219 681 MobiDBLite consensus disorder prediction 186 227 - -
Phac1g01219 681 MobiDBLite consensus disorder prediction 188 202 - -
Phac1g01219 681 Pfam Exo70 exocyst complex subunit 299 666 IPR046364 GO:0000145|GO:0005546|GO:0006887
Phac1g01219 681 Gene3D Exocyst complex component Exo70 123 678 - -
Phac1g01219 681 MobiDBLite consensus disorder prediction 1 60 - -
Phac1g01219 681 SUPERFAMILY Cullin repeat-like 126 669 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01219 Phac-Chr1 12682501 12684546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01219 15 681 EXO70 exocyst subunit family AT5G13990 46.485 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01219 K07195 - gmx:100820172 943.34