Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01213 ATGGCCAGTGAAAATGGTTTCCAGCTTAGTGTGAAGCTAGGTGAACCAACTCTCGTTCCTCCAGCTGAAGAAACAAAGAAGGGTTTGTATTTCCTATCTAACCTTGACCAGAACATTGCAGTGATTGTGAGAACTGTTTATTGCTTCAAAACTGGTGAGAGGGGGAATGAGAAGGCTGGGAAAGTGCTGAAGAATGCATTGAAGAAGGTTCTTGTCCACTATTACCCTCTTGCCGGGAGGCTTACTATAAGCTCAGAGGGTAAGCTCATAGTGGATTGCACAGGGGAAGGTGCCTTGTTTGTGGAGGCTGAAGCAAACTGTTCAATGGAAGAGATCGGTGACATCACAAAGCCAGACCCTGGAACTCTTGGTAAGCTGGTTTATGACATTCCTGGAGCGAAGCACATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACCAAGTTCAAATGTGGAGGCTTTGCTCTTGGGTTGTGTATGAATCACTGCATGTTTGATGGCATTGGTGCAATGGAGTTTGTGAACTCTTGGGGACAAGTAGCCAGAGACTTGCCACTCTCAATCCCTCCAGTACTGGACAGAAGCATACTCAAGGCAAGAAACCCACCAAAGATAGAGCACCTGCATGAAGAATTCGCTGACATAGAAGACAAATCCAACACTAATAGTTTATACGAAGATGAAATGGTTTACAGGTCCTTCTGTTTTGATCCGGAGAAACTAAAGGAGCTGAAGGTGAAAGCAATGCAAGATGGGGCTCTTGATGCGTGCACAACATTTGAAGTCCTCTCAGCATTTGTGTGGATAGCAAGGACGAAGGCCCTGAAAATGTCACCTGACCAACAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCCAAGTTCAATCCCCCTCTTCCAAAAGGGTACTTTGGAAATGGAATTGTGATAACAAATTCTGTGTGCCGAGCTGGGGAACTAACACAAAAGCCTTTGTCGTTTGCTGTGGGGCTCATTCAAGACGCAATCAAGATGGTGACAGACAGCTACATGAGATCAGCAATTGATTACTTTGAGGTGACAAGAACAAGGCCTTCCCTTACTTGCACTCTTCTAATAACAACTTGGTCTAGGCTTTCCTTTCACACCACTGATTTTGGATGGGGAGACCCAGTGCTGTCAGGCCCAGTGTCACTGCCAGAGAAGGAAGTGATTTTGTTCCTCTCCCATGGCCAAGAGAGAAGAAATATAAATGTGCTTCTCGGTTTGCCTGCTACTGTCATGAAGATTTTCCAAGATTTGATGCAGATATAA 1293 0.4524 MASENGFQLSVKLGEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTGERGNEKAGKVLKNALKKVLVHYYPLAGRLTISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGQVARDLPLSIPPVLDRSILKARNPPKIEHLHEEFADIEDKSNTNSLYEDEMVYRSFCFDPEKLKELKVKAMQDGALDACTTFEVLSAFVWIARTKALKMSPDQQTKLLFAVDGRAKFNPPLPKGYFGNGIVITNSVCRAGELTQKPLSFAVGLIQDAIKMVTDSYMRSAIDYFEVTRTRPSLTCTLLITTWSRLSFHTTDFGWGDPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPATVMKIFQDLMQI* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01213 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 426 - -
Phac1g01213 430 Gene3D - 6 211 IPR023213 -
Phac1g01213 430 FunFam Tryptamine hydroxycinnamoyl transferase 216 429 - -
Phac1g01213 430 Pfam Transferase family 11 427 - -
Phac1g01213 430 FunFam Spermidine hydroxycinnamoyl transferase 9 212 - -
Phac1g01213 430 Gene3D - 212 429 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01213 Phac-Chr1 12617209 12619875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01213 9 428 Monolignol Biosynthesis Gene Families AT5G48930 34.028 1.47e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01213 K15400 - gmx:100804504 803.897