Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01196 ATGGATTGGGACATTAGGATGGAAATTGCAGGAATGTATATACTCAAAACTATATTTTTGCTTAAGGTTCGAGAGGTTAGCTATCAACCACCGGGGACTCAGCTTAAACTTCTAAATTCAGTTAGCTTTTCACTTCCAGAGAAAAGTTTTGGTCTAATTTTCGGACAGAGTGGAAGTGGAAAAACAACCCTGTTGCAGCTTCTTGCAGGAATAAGCAAGCCAACGTCGGGATCCATTTACATCCAAAAGTATGGGAATGATGGAAATCCTAGTCAAACTGCAGAGCCCTTGGTGCCGGAAAGGGTTGGTATTGTCTTCCAGTTTCCCGAGAGGTATTTTGTCACAGATAATGTGCTTGATGAAGTCACTTTTGGTTGGCCAAGGCAAAAGGGTAACCATCACCTTAGGGAGAATCTTACTCTAGGGCTACAAAGGGCAATTAACTGGGTTGGATTAAATGGTATATCATTGGATAAAAATCCTCACTCCCTCAGTGGGGGTTACAAACGCCGCCTTGCCTTGGCAATACAATTAGTGCAAACCCCTGATCTATTGATATTGGATGAACCTCTTGCAGGACTCGATTGGAAAGCACGTGCTGATGTTGTGAAGCTTTTGAAGCATTTGAAAAAAGAATTAACTGTGCTAGTTGTTAGCCATGATTTGAGAGAATTTGCGAGTCTAGTTGATCGATCATGGAGAATGGAAATGGGTGGCAACCTTAAACAGGAATTTCTACCATTTTGA 747 0.4177 MDWDIRMEIAGMYILKTIFLLKVREVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQKYGNDGNPSQTAEPLVPERVGIVFQFPERYFVTDNVLDEVTFGWPRQKGNHHLRENLTLGLQRAINWVGLNGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLKQEFLPF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01196 248 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 21 246 IPR003439 GO:0005524
Phac1g01196 248 SMART AAA_5 47 239 IPR003593 GO:0016887
Phac1g01196 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 238 IPR027417 -
Phac1g01196 248 PANTHER HEAVY METAL TRANSPORTER 17 245 - -
Phac1g01196 248 CDD ABC_cobalt_CbiO_domain1 22 238 IPR015856 GO:0005524|GO:0016020|GO:0055085
Phac1g01196 248 Gene3D - 16 245 IPR027417 -
Phac1g01196 248 Pfam ABC transporter 38 191 IPR003439 GO:0005524
Phac1g01196 248 FunFam ABC transporter I family member 11 chloroplastic 12 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01196 Phac-Chr1 12251856 12269450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01196 20 222 Calmodulin-binding Proteins AT2G36910 26.636 1.99e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01196 - - vun:114196181 431.795