Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g01192 | ATGGAGAATTATACCATGTTGTTCCCTTGTCCCAATTCTTCCAGCTACCCCATTTCAAGCACTGGTGTGGGAATCTCTCAGCATGGTTTTGGTGGTCAAAGCTCCAATGCATTCCTAGGTCTAAGGCCTAGTAATGAGAGTAGTGGTAGTGATCATGAAAAGAGAGGAGAAGGTGGTAGAGATGCTGCCATGTTAATGTCTCAGATCAGTGGTGGCATTAATGGGAGTGATGAGTCAGGTAGTTTGGGAAATGGTAGTAGTAATAGTAACAAAAAGAAAGGGGAGAAAAAGGTTAGAAAGCCTAGATATGCTTTCCAAACAAGGAGCCAGGTTGATATTCTTGATGATGGTTATCGGTGGAGGAAGTATGGCCAAAAAGCTGTAAAAAACAACAAGTTTCCAAGGAGTTACTACCGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTCCAACGCCTAACTAAAGACGAAGGGGTAGTGGTGACTACTTACGAGGGAGTCCACACTCACCCAATTGAGAAAACAACAGATAACTTCGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA | 582 | 0.4313 | MENYTMLFPCPNSSSYPISSTGVGISQHGFGGQSSNAFLGLRPSNESSGSDHEKRGEGGRDAAMLMSQISGGINGSDESGSLGNGSSNSNKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g01192 | 193 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 47 | 176 | IPR044810 | GO:0003700 | |
Phac1g01192 | 193 | Pfam | WRKY DNA -binding domain | 115 | 172 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g01192 | 193 | MobiDBLite | consensus disorder prediction | 34 | 58 | - | - | |
Phac1g01192 | 193 | SMART | WRKY_cls | 114 | 173 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g01192 | 193 | FunFam | WRKY transcription factor 57 | 100 | 174 | - | - | |
Phac1g01192 | 193 | MobiDBLite | consensus disorder prediction | 70 | 101 | - | - | |
Phac1g01192 | 193 | Gene3D | WRKY domain | 99 | 173 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g01192 | 193 | ProSiteProfiles | WRKY domain profile. | 109 | 174 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g01192 | 193 | SUPERFAMILY | WRKY DNA-binding domain | 106 | 173 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g01192 | 193 | MobiDBLite | consensus disorder prediction | 70 | 89 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g01192 | Phac-Chr1 | 12206454 | 12208691 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g01192 | 102 | 193 | WRKY Transcription Factor Family | AT5G13080 | 88.043 | 6.36e-59 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Phac1g01192 | WRKY | 1.9e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g01192 | - | - | pvu:PHAVU_001G088200g | 349.747 |