Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01178 ATGTTGCCCTGCGATTACTGCCACTCCAAACCCGCCTTACTCTTCTGCCGACCCGACTCTGCCAAACTCTGTCTCCTCTGCGACCACCACGTCCACACCGCTAACGCCCTCTCCCTCAAGCACGTCCGCTTCCAGATTTGCGCCAACTGCGACACCGCCGCTACCGTCCGCTGCTCCGCCGACAATCTCCTCCTCTGTCACACCTGCGACCTCGACGCTCACGCCAACGCCCCCGCTTCCCTCCACCACCGCCACCGCCTCCACGGCTTCTCTGGCTGCCCCTCCCTCCCCGAGATGGCCTCCGCCCTCGGCCTCGATTTGCGGCCCCGCCACGCCAACTGCCGCGACGAGGTCTACGAGCAGGTCCTCGAAGTCGCGCGCAGGAGGAACGAGAACGAGTTTGCGTGTGCCGAGACCGGGGAATTCAGGTTTGACTCCGAAAACGACGTCGTCGATGAGATGTTGCTGCAGCAGACGCCGTTCACGTCCTTGCTCGGGATGCCTGATTCCCAATCTGAATTTGACGCCGCCAAAAGTAACGATAACGGTTACGGAGGCCAAGCAGGAGATCTTCACTGGAGTTTTGATCCCAACTATCAGTCTCCTCAGGTGTGGGATTTTCAATTACAGAAATCAAGATGTTGTGATGAACCAAGAGTGGTGACATTTGATGGTCTAGAAGTTCCAAAATCATTTCAGGATGTGCACAATATGAATTACTCGACTGGTGATGATATTCTATCAAGAAATAACCAATCGGATCAGTCATCATCAAGCCACGGAAAGAAGAAAGAAGAAAGCAATAAGAAAGCTAGAGATGGGTTATCAACAGAGTCCAAATTGTTAGAATCCATACCGTATAGTGCCACCAACAACGTCGTAGTCATGGAGCATCTAGTGGGTGGGAATGCAAATGTTAGCACCTTAAAAGCCAGGGTTAGCTTGGAAGAGTTGGCTAAGAATAGAGGTGATGCCATGTTACGCTACAAAGAGAAGAAGAAATCTCGAAGGTATGATAAGCACATTCGCTATGAATCAAGAAAGGCCAGGGCTGATACTAGAAAGAGGGTGAGAGGGAGATTTGTGAAGGCAAGTGATGTTCAAGCGTGA 1110 0.5216 MLPCDYCHSKPALLFCRPDSAKLCLLCDHHVHTANALSLKHVRFQICANCDTAATVRCSADNLLLCHTCDLDAHANAPASLHHRHRLHGFSGCPSLPEMASALGLDLRPRHANCRDEVYEQVLEVARRRNENEFACAETGEFRFDSENDVVDEMLLQQTPFTSLLGMPDSQSEFDAAKSNDNGYGGQAGDLHWSFDPNYQSPQVWDFQLQKSRCCDEPRVVTFDGLEVPKSFQDVHNMNYSTGDDILSRNNQSDQSSSSHGKKKEESNKKARDGLSTESKLLESIPYSATNNVVVMEHLVGGNANVSTLKARVSLEELAKNRGDAMLRYKEKKKSRRYDKHIRYESRKARADTRKRVRGRFVKASDVQA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01178 369 MobiDBLite consensus disorder prediction 239 257 - -
Phac1g01178 369 SMART bboxneu5 1 46 IPR000315 GO:0008270
Phac1g01178 369 SMART bboxneu5 47 87 IPR000315 GO:0008270
Phac1g01178 369 CDD Bbox1_BBX-like 3 46 - -
Phac1g01178 369 ProSiteProfiles CCT domain profile. 322 364 IPR010402 GO:0005515
Phac1g01178 369 MobiDBLite consensus disorder prediction 239 277 - -
Phac1g01178 369 Pfam CCT motif 322 364 IPR010402 GO:0005515
Phac1g01178 369 MobiDBLite consensus disorder prediction 258 277 - -
Phac1g01178 369 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 365 - -
Phac1g01178 369 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01178 Phac-Chr1 11907407 11911554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01178 1 366 C2C2-CO-like Transcription Factor Family AT2G33500 34.606 1.61e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac1g01178 CCT 1.7e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01178 - - vum:124830018 595.89