Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01167 ATGATGATGGATCAGCGACAGCGAGAGAAACTGCTTCACAAAACCGAGGCCTGTGCTTTCGTGGCAGGTGTTGATGCCGAGCTTCGACTTGTCGCCGCCCCAGGGGACATCACCAACACCAACAACGTTAACAGGATCATCAACAGCACCAGCAGCAACTTATCTCAATCTCACGGGTCGGGTCGGATCCACGACACCAACCACCTTGGTCTCGTCGCTGCGGTTACCAACCTCGGAACTGTTAACAGGAAGAAGAGGATGCCCAGGCAGCGAAGATCCACCACCACCTCCACCACCAACCCCACCTTCTTTATGCAGATGCACCACTTCGACAACCCTTTCTCCTCTAAGCACCACCAGCCTAATTTACCATCTTCAACTCCCTCCGCCTCCTCGCACGTGCCATCCTCCTCTCTCCACTCTGTTAAACCCTCCACTCCTCCCCCGCCCGCACGTAAAGCAGCAGAGACTTTCCTTCCACAACTGGATTCAAAAGAAGGAATTTTGATGAACATGGATGATAAAGATGGTACTCATGTGTGGAATTTCAAGTACAGGTTTTGGCCAAACAACAACAGTAGGATGTACGTACTTGAAAATACAGGAGAATTTGTCAGCACACATGGCCTTCGATTTGGCGATACCATTGTGGTTTACCAACATATTGAAAACAATAACTATGTTATTCAGGCTAGAAAAGGTTCGGAGGAGGATGAATTTATGGAACAAAGTAGTGAGACAGTGAACGACATGTTCCTGAGTGACTTGGAGGTGAACAAACCTGGTTGTTTCAATATAACTTATCCTGCAGTGAATGATAGTGGCATGTCCTTCATATATGACACTACTTTCTCAAATGACTCCCCACTTGACTTTTTGGGTGGATCAATGACTAATCTTTCAAGGATTGGACCAGTTGAAACCTTTGGTTCTGTTGAGAATTTGTCCCTTGATGACTTCTATTAA 966 0.4679 MMMDQRQREKLLHKTEACAFVAGVDAELRLVAAPGDITNTNNVNRIINSTSSNLSQSHGSGRIHDTNHLGLVAAVTNLGTVNRKKRMPRQRRSTTTSTTNPTFFMQMHHFDNPFSSKHHQPNLPSSTPSASSHVPSSSLHSVKPSTPPPPARKAAETFLPQLDSKEGILMNMDDKDGTHVWNFKYRFWPNNNSRMYVLENTGEFVSTHGLRFGDTIVVYQHIENNNYVIQARKGSEEDEFMEQSSETVNDMFLSDLEVNKPGCFNITYPAVNDSGMSFIYDTTFSNDSPLDFLGGSMTNLSRIGPVETFGSVENLSLDDFY* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01167 321 MobiDBLite consensus disorder prediction 82 154 - -
Phac1g01167 321 MobiDBLite consensus disorder prediction 116 141 - -
Phac1g01167 321 SUPERFAMILY DNA-binding pseudobarrel domain 153 231 IPR015300 -
Phac1g01167 321 Gene3D - 150 248 IPR015300 -
Phac1g01167 321 Pfam B3 DNA binding domain 158 233 IPR003340 GO:0003677
Phac1g01167 321 CDD B3_DNA 152 233 IPR003340 GO:0003677
Phac1g01167 321 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 152 246 IPR044800 GO:0003700
Phac1g01167 321 MobiDBLite consensus disorder prediction 92 106 - -
Phac1g01167 321 SMART B3_2 141 235 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01167 Phac-Chr1 11774990 11779304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01167 42 321 B3 DNA Binding Superfamily AT3G26790 41.772 4.67e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac1g01167 B3 1.6e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01167 K09287 - gmx:100783961 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g01167 1 11774990 11779304 Phac1g01167 1 11774990 11779304 ECH