Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g01166 ATGATGATGGATCAGCGACAGCGAGAGAAACTGCTTCACAAAACCGAGGCCTGTGCTTTCGTGGCAGGTGTTGATGCCGAGCTTCGACTTGTCGCCGCCCCAGGGGACATCACCAACACCAACAACGTTAACAGGATCATCAACAGCACCAGCAGCAACTTATCTCAATCTCACGGGTCGGGTCGGATCCACGACACCAACCACCTTGGTCTCGTCGCTGCGGTTACCAACCTCGGAACTGTTAACAGGAAGAAGAGGATGCCCAGGCAGCGAAGATCCACCACCACCTCCACCACCAACCCCACCTTCTTTATGCAGATGCACCACTTCGACAACCCTTTCTCCTCTAAGCACCACCAGCCTAATTTACCATCTTCAACTCCCTCCGCCTCCTCGCACGTGCCATCCTCCTCTCTCCACTCTGTTAAACCCTCCACTCCTCCCCCGCCCGCACGTGAAATCCATCATAGAAACTTGAGGTTCCTTTTCAAAAAGGAATTGAAGAACAGTGATGTTAGCTCCCTAAGGAGAATGATATTGCCAAAGAAAGCAGCAGAGACTTTCCTTCCACAACTGGATTCAAAAGAAGGAATTTTGATGAACATGGATGATAAAGATGGTACTCATGTGTGGAATTTCAAGTACAGGTTTTGGCCAAACAACAACAGTAGGATGTACGTACTTGAAAATACAGGAGAATTTGTCAGCACACATGGCCTTCGATTTGGCGATACCATTGTGGTTTACCAACATATTGAAAACAATAACTATGTTATTCAGGCTAGAAAAGGTTCGGAGGAGGATGAATTTATGGAACAAAGTAGTGAGACAGTGAACGACATGTTCCTGAGTGACTTGGAGGTGAACAAACCTGGTTGTTTCAATATAACTTATCCTGCAGTGAATGATAGTGGCATGTCCTTCATATATGACACTACTTTCTCAAATGACTCCCCACTTGACTTTTTGGGTGGATCAATGACTAATCTTTCAAGGATTGGACCAGTTGAAACCTTTGGTTCTGTTGAGAATTTGTCCCTTGATGACTTCTATTAA 1056 0.4593 MMMDQRQREKLLHKTEACAFVAGVDAELRLVAAPGDITNTNNVNRIINSTSSNLSQSHGSGRIHDTNHLGLVAAVTNLGTVNRKKRMPRQRRSTTTSTTNPTFFMQMHHFDNPFSSKHHQPNLPSSTPSASSHVPSSSLHSVKPSTPPPPAREIHHRNLRFLFKKELKNSDVSSLRRMILPKKAAETFLPQLDSKEGILMNMDDKDGTHVWNFKYRFWPNNNSRMYVLENTGEFVSTHGLRFGDTIVVYQHIENNNYVIQARKGSEEDEFMEQSSETVNDMFLSDLEVNKPGCFNITYPAVNDSGMSFIYDTTFSNDSPLDFLGGSMTNLSRIGPVETFGSVENLSLDDFY* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g01166 351 CDD B3_DNA 161 263 IPR003340 GO:0003677
Phac1g01166 351 MobiDBLite consensus disorder prediction 82 153 - -
Phac1g01166 351 MobiDBLite consensus disorder prediction 116 141 - -
Phac1g01166 351 SUPERFAMILY DNA-binding pseudobarrel domain 161 261 IPR015300 -
Phac1g01166 351 ProSiteProfiles B3 DNA-binding domain profile. 163 265 IPR003340 GO:0003677
Phac1g01166 351 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 82 276 IPR044800 GO:0003700
Phac1g01166 351 Pfam B3 DNA binding domain 163 263 IPR003340 GO:0003677
Phac1g01166 351 Gene3D - 159 278 IPR015300 -
Phac1g01166 351 SMART B3_2 163 265 IPR003340 GO:0003677
Phac1g01166 351 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g01166 Phac-Chr1 11774990 11779304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g01166 42 351 B3 DNA Binding Superfamily AT3G26790 46.512 1.49e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac1g01166 B3 3.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g01166 K09287 - gmx:100783961 449.129